Gene Mvan_3618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3618 
Symbol 
ID4647184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3850381 
End bp3851490 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content71% 
IMG OID639807091 
Productbifunctional RNase H/acid phosphatase 
Protein accessionYP_954415 
Protein GI120404586 
COG category[L] Replication, recombination and repair
[G] Carbohydrate transport and metabolism 
COG ID[COG0328] Ribonuclease HI
[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.324125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGTGG TCGTCGAGGC CGACGGGGGG TCGCGCGGCA ACCCGGGGCC TGCGGGTTAC 
GGCGCGGTGG TGGTGTCGGC GGACCGGGTT TCGGTGCTCG CCGAAACCAG CTCGGCGATC
GGCACGGCGA CCAACAATGT CGCCGAATAC CGCGGGCTGA TCGCCGGACT GGAGGCCGCA
GCGGAGCTGG GTGCCACCGA GGTCGAGGTC CTGATGGATT CCAAGCTCGT GGTGGAGCAG
ATGTCAGGGC GGTGGCGCGT CAGGCACCCC TCCCTGGCCC CGCTGCACCA GCAGGCCCGC
GATCTCGAGC GGAGGTTCCA GCGGGTCAGC TACCGATGGG TCCCGCGCGC GCAGAACAGT
CGTGCCGACC GTCTGGCCAA CGAGGCGATG GACGCGGCGG GTGGCGGATC GATGGACGCG
GCCGGTGGCG GATCGATGGA CGCGGCCGGT GGCGGATCGG AGGTCGTCAC CAACCCGGCC
GGCTGGACGG GCGCCAAAGG AGCGCCGACC CGGCTGTTGC TGCTGCGCCA CGGGCAGACC
GAACTGTCGG TGCAGCGCCG CTACTCGGGT CGGGGGAACC CCGAGCTGAC GGAGCTGGGC
ATTCAGCAGG CCGACGCGGC GGCGCGCTAT CTGGGGCAGA AGGGCGGGAT CGACGCCGTC
ATCTCCTCGC CGCTGCAACG TGCCCACGAC ACCGCCGCGG CCGCGTCCAA GGCGATGGGT
CTGGACGTGG AGGTCGACGA CGACCTGATC GAGACCGATT TCGGCGCATG GGAAGGGCTG
ACCTTTCAGG AGGCGGCCCA ACGGGATCCC GAGCTGCACC TGCGCTGGCT GCGCGACACG
TCGGTGCCGC CGCCGGGCGG AGAGAGTTTC GACGCCGTTG CGGCGCGGGT GTCGCGGGCG
CAGCAGCGCC TCATCGCGAA GCATCCCGGC CAGACGCTGC TGCTGGTGTC GCATGTGACG
CCGATCAAGA CGCTGCTGCG GATGGCGCTC GACGCCGGCC CGGCGATCCT CTACCGGCTG
CACCTGGATC TGGCGTCGCT GTCCATTGCG GAGTTCTACC CGGACGGCGC GGCGTCGGTC
CGGCTGGTCA ACCAGACCAC CTACCTCTGA
 
Protein sequence
MRVVVEADGG SRGNPGPAGY GAVVVSADRV SVLAETSSAI GTATNNVAEY RGLIAGLEAA 
AELGATEVEV LMDSKLVVEQ MSGRWRVRHP SLAPLHQQAR DLERRFQRVS YRWVPRAQNS
RADRLANEAM DAAGGGSMDA AGGGSMDAAG GGSEVVTNPA GWTGAKGAPT RLLLLRHGQT
ELSVQRRYSG RGNPELTELG IQQADAAARY LGQKGGIDAV ISSPLQRAHD TAAAASKAMG
LDVEVDDDLI ETDFGAWEGL TFQEAAQRDP ELHLRWLRDT SVPPPGGESF DAVAARVSRA
QQRLIAKHPG QTLLLVSHVT PIKTLLRMAL DAGPAILYRL HLDLASLSIA EFYPDGAASV
RLVNQTTYL