| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3588 |
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| Symbol | |
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| ID | 4647153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 3815463 |
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| End bp | 3817406 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639807062 |
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| Product | phage integrase family protein |
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| Protein accession | YP_954386 |
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| Protein GI | 120404557 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00892563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGACCACGG TGTTAGTCGG CCAACCCGTA GGCGCCGACG AGGTGGTGGC CGATTATCTC
GACCACGTCG CCACCCTGGG TTTGAGCGGG CGGGCGGTAC GTGACCGGAT TCGGATCGCT
CGCGACTTCA CCGCACGCCA CCGCGACCTG CACGCCTGGA TGACGCTGCC GGCAGCCGAG
CGGATCGCCG AGATACGGGA CACCGGGGCG TGGCCGCTGA TCTGTCACAC GATCGGCACC
GGCCGGTTAC GGCTGGACGT CGAGCTGGCC GCGGTCAAAC AGTTAACCGG ACTGGGCCGC
GCAGTGGAGG ACCGGGATCC GAGCGGATTC GCCACGTTAC GGAATGCGGG AATTCGGTTG
GGCTGGAGAA GTTCCTGGGT CGAGACGGTC CTCGGCGAAT GTCTGGCGGT AGTGCTGGCA
CACCACGGCG GAATGGTCGC CGACCTGACC GGCGACGCGC TCGACGACTT CGACGCCACG
CTGTCACGTA CCGCGGTGCC GCCATCGTCG CGGCGGGCAT ACCGGGCGCG GCTGGCCAGC
CTACGGCAGC TGTTGTTCGA GACCGCGGTC ATCGACACCG CGCCGAAACG CCGACGGTGG
GCCCGTAGCC ACGAGCAGCG CTTCACCGAG GTGGAGATGC CCGACCCGAT CCGTCAGACG
TTGCTGCGCT ACATCGGCGT GCGCGCGGCG GTGCTGCGGC CCAAATCCGT CGAGTCGCTG
ATCAACGACC TGCTGCCCTT CGCCGAATAT CTCACCGCTC ACCATCCCGA CCTCACCAGC
CTGCGTGGAC TCGACCGGAG CTGCATCGAG GGCTACCTGA AATGGAATCG CACCCGGGGC
TGGCGTGGTC AGCGCGCCGC CGCGGGCGCC GGGCGCACCG TCTCGGCCGC GGTGGCCCAG
TCGGCAGTGC TCAGTCTGCG TAACCTGCTC GACGACATCA CCGCCTGGGG CTGGGCGCAG
GCCCCGCCAC GGCGGTTGGT ATTCGCCGCC GACGTCCCCA AGCTCGACCA GCCGTTGCCA
CGCGCGCTAG CACCCGATGT GGACGCGGCA GTGATGAACG CCGTTGCTCA CCTGCAGGAT
CCGTTCGCCC GCATCGGCCT GACCGTGCTG CGTGGTGCCG GCCTGCGGGC GGGGGAACTG
CTCGACCTCG AACTGGGCAG CATCATCGAC TACGGGCCGG CCGGAACCTG GCTGAAGGTG
CCACTGGGCA AGCTCGCCAC CGAACGCATG GTCCCGCTCT CCGCCGCGAC CCTCGCCGCG
CTCGACGAGT GGGTCGCCCT CCGCGGCACG CACCGGCCGC TGCCGCACCC ACGCACCGGC
GTGCTCACCG ACTTTCTGTT CACCCGGCAC GGACGCCGCC TGGGCTACAC CCGGCTGCGC
AACGGGCTGC TCACCGCCGC TGAATCCGCC GGGTTGCACC GTCCCGACGG CGGCGTCCTG
ATGGTCACTC CACATCAGTT GCGCCACACC TGGGCCACCG AACTCGCCAA CGCCGGGATG
AGTCTGCAGG CCTTGATGTC CTTACTCGGG CACGTCACTC CACAAATGAC GATCCGCTAC
GCCACCCTGG CCTCGCCCAC CCTGCGCGCC GCCTACGACG AAGCGATGGG CAAGATGCGC
CGCCAGTTCA CCCTCACCCC GGTCGGCAAA CCGATCCTGC CCGACAAGGT CGGCTGGCTG
CACAGTGAAA TGCTGAAAAC CCGCGTCGCA CACGGATACT GCGCTCGCCA CGAATCCGCG
GGCGCGTGCC CGTATGCCAA TATCTGCGAA ACCTGCGACA ACTACATCAC CGCCCCCGAA
TTCCGCGACA CGCTCACCAA CCAACTCGCC GACGTCCAGG ACCTTAGAAC CGACGCCGAG
TGCCGCGGCT GGACCGACGA AGCAGCCCGC CACGACCGCG TCGCCCACGC CCTTACCGAC
CACCTCCACC GCCTCGATCA TTGA
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| Protein sequence | MTTVLVGQPV GADEVVADYL DHVATLGLSG RAVRDRIRIA RDFTARHRDL HAWMTLPAAE
RIAEIRDTGA WPLICHTIGT GRLRLDVELA AVKQLTGLGR AVEDRDPSGF ATLRNAGIRL
GWRSSWVETV LGECLAVVLA HHGGMVADLT GDALDDFDAT LSRTAVPPSS RRAYRARLAS
LRQLLFETAV IDTAPKRRRW ARSHEQRFTE VEMPDPIRQT LLRYIGVRAA VLRPKSVESL
INDLLPFAEY LTAHHPDLTS LRGLDRSCIE GYLKWNRTRG WRGQRAAAGA GRTVSAAVAQ
SAVLSLRNLL DDITAWGWAQ APPRRLVFAA DVPKLDQPLP RALAPDVDAA VMNAVAHLQD
PFARIGLTVL RGAGLRAGEL LDLELGSIID YGPAGTWLKV PLGKLATERM VPLSAATLAA
LDEWVALRGT HRPLPHPRTG VLTDFLFTRH GRRLGYTRLR NGLLTAAESA GLHRPDGGVL
MVTPHQLRHT WATELANAGM SLQALMSLLG HVTPQMTIRY ATLASPTLRA AYDEAMGKMR
RQFTLTPVGK PILPDKVGWL HSEMLKTRVA HGYCARHESA GACPYANICE TCDNYITAPE
FRDTLTNQLA DVQDLRTDAE CRGWTDEAAR HDRVAHALTD HLHRLDH
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