Gene Mvan_3543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3543 
Symbol 
ID4647927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3768744 
End bp3770030 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content69% 
IMG OID639807020 
Productputative integral membrane protein 
Protein accessionYP_954344 
Protein GI120404515 
COG category[S] Function unknown 
COG ID[COG5650] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.774005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACA GGCAGTCGCC CGGCGGGGCT GGTTGGAAGC CGACGCTGGC GTGGCGGCTG 
TTCCAGCTCT TGACGTTTGC AGCTCTGGCG GCGGCGGCGT GGCGCCTCCT CGGGCACGTT
CCGTACCGCA TCGACATCGA CGTCTACCGG ATGGGCGGCC GGGCCTGGCT CGACGGCCAG
TCGTTGTACG CCGACGGCGC GATGTTCCAG ACGCGGGGCG GGTTGGAACT GCCGTTCACC
TATCCGCCGC TGGCCGCCGT CGCGTTCGCG CCGTTCGCGC TGCTGTCGCT GGAGGCGGCA
AGTGTGGCGA TCACGCTGAC CACGCTGATC CTGCTGCTGG TCTCCACGGT GATCGTGCTG
ACGCGGCTGG ACGTGTGGCC GAGCACCCGG GTCACCTCCG AGCCGGCCTG GTTGCGCAGG
TGCTGGCTGG CGGCGGCGAT CGTCGCGCCC GCGGTGCTCT ATCTGGAACC TCTGCGGGCG
AACTTCGACT TCGGCCAGAT CAACGTGGTG CTGATGACGC TGGTGATCGC CGACTGCGTG
CCGCGTCGCA CACCGTGGCC GCGGGGAGTG CTGCTGGGTG TGGCGATCGC GGTGAAGCTG
ACACCTGCGG TGTTCCTGCT GTATTTCCTG CTCCGTCGTG ACGTGCGCGC GCTACTGGTC
ACAGCGGCGT CCGCGGTGGT GGCGACGCTG GCCGGCTTCG CGCTGGCATG GCGGGATTCC
TGGGAATACT GGTTGGAGAC CGTCCGCAAC ACCGACCGCA TCGGCACGGC GACCCTGAAC
ACGAACCAGA ACATCGCGGG TGTGCTGGCC CGGCTGGGGC TCGGTGAAGG TGAACGCTTC
GTGGTGTGGA CCGTGTTGTG CTTCGCGGTG CTCGGCCTCA CCGTGTGGGC GGCGCGGCGG
GCCCTGCGCG CCGAGCAGCC GGTGCTTGCC CTGATCTGTG TGGCGATGTT CGGCCTGGTG
GTCTCCCCCG TGTCGTGGTC GCACCACTGG GTGTGGGCAC TGCCCACGGT GCTGGTGACG
GCCGTGCTCG CGGTGCGGCT GCGCCATGTC GCGCTCGCAG TGGTGTCGGC GGCCGGGCTC
GCGCTGATGG TGTGGACACC GATCACGTTG CTGCCCGAGC ACCGGGAAAC CACCGCATCG
CTGTGGCGTC AACTCGTCGG CGGCTCCTAC CTGTGGTGGG CGCTCGCCGT GATCGTCGTC
AGCGCGACCG TGACCCTTCC ACGACCCGGC AGGGACGCTC CCGGCCTGGG TGCGGCCCAA
CCGGCCACCA ACGGCGTCAA AGCCTAG
 
Protein sequence
MSNRQSPGGA GWKPTLAWRL FQLLTFAALA AAAWRLLGHV PYRIDIDVYR MGGRAWLDGQ 
SLYADGAMFQ TRGGLELPFT YPPLAAVAFA PFALLSLEAA SVAITLTTLI LLLVSTVIVL
TRLDVWPSTR VTSEPAWLRR CWLAAAIVAP AVLYLEPLRA NFDFGQINVV LMTLVIADCV
PRRTPWPRGV LLGVAIAVKL TPAVFLLYFL LRRDVRALLV TAASAVVATL AGFALAWRDS
WEYWLETVRN TDRIGTATLN TNQNIAGVLA RLGLGEGERF VVWTVLCFAV LGLTVWAARR
ALRAEQPVLA LICVAMFGLV VSPVSWSHHW VWALPTVLVT AVLAVRLRHV ALAVVSAAGL
ALMVWTPITL LPEHRETTAS LWRQLVGGSY LWWALAVIVV SATVTLPRPG RDAPGLGAAQ
PATNGVKA