Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3536 |
Symbol | |
ID | 4647920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 3761456 |
End bp | 3762535 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639807013 |
Product | polyprenyl synthetase |
Protein accession | YP_954337 |
Protein GI | 120404508 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00519723 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.472476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGCAT CGGCACCGTC AGCCGTCGAG CTGGCAGCGG CCGTCACCGA ACAGCTTCGC GACTACCTGC GTGCTCGCCG CCGAGATGCG GCATACATCG GCGCGGGCTA TGCGGTGTTG ACCGAGGCCG TCGAAGAGTT CGTGCTGCGC GGCGGGAAAC GACTTCGCCC CGCGTTCGCG TACTGGGGCT GGCGCGCCGT CGCCGGCACA GAACCCGGAC CGGAGGCGCT GCGGTTGTTC TCCGCACTCG AGCTTCTGCA CGCGTGCGCA CTCGTTCACG ACGACGTCAT CGACGCCTCG GCCACTCGGC GCGGCCTGCC GACCGTGCAC CGGATCTTCG CCGAACGGCA CCGCAGCAAC AACTGGCTCG GCTCGTCGGA ACAGTTCGGC CTGTCGGCGG CGATTCTGCT CGGCGACGTC GCGCTGGTGT GGGCCGACGA CATCGTCGCG AGCGCCGAGA TCGGCGTCGA AGCACACCGG CGGGTTCAGC GGGTGTGGGC GGCGATCCGG ACCGAGGTTC TCGGCGGGCA GTACCTGGAC ATCGTCAACG AGGCCACCGG CGCAGAGACC GTGGCGTCGG CACTGACCGT CAACATCTAC AAGACCGCGT CCTACACGAT CTCCCGTCCG CTGCAGCTGG GCGCCGCGGC CGCTGCCGAC TGCCCCGAGG TGCTCTCGGC GTTCCACGAA CTGGGAACCA GCCTCGGGGT GGCGTTCCAG CTGCGCGACG ACGTCCTCGG AGTGTTCGGC GACCCGGCCG TCACCGGCAA GCCGTCCGGC GACGACCTGC GCTCCGGCAA GCGCACGGTG CTGCTCGCCG AGGCCGTCGA GCTCGCCGAG AAGCACGATC AGATCGCGGC CAAACTACTG CGCACGTCCA TCGGCACCGA CCTGACCGAC GCCCAGGTCA AGGAGGTGTG CCTGGTGATC GAGTCGGTCG GGGCGCTGGC GGCCGTCGAG AGCCGGATCG ACACCCTGAC CCGGCGCGCG CTGGACATCC TCAACTCCGC GCCCATCGAC GTACAGGCCA AGGCCGGGCT GGCCGAGCTC GCCAGGATGG CCGCGAACCG GTCCGCCTAG
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Protein sequence | MDASAPSAVE LAAAVTEQLR DYLRARRRDA AYIGAGYAVL TEAVEEFVLR GGKRLRPAFA YWGWRAVAGT EPGPEALRLF SALELLHACA LVHDDVIDAS ATRRGLPTVH RIFAERHRSN NWLGSSEQFG LSAAILLGDV ALVWADDIVA SAEIGVEAHR RVQRVWAAIR TEVLGGQYLD IVNEATGAET VASALTVNIY KTASYTISRP LQLGAAAAAD CPEVLSAFHE LGTSLGVAFQ LRDDVLGVFG DPAVTGKPSG DDLRSGKRTV LLAEAVELAE KHDQIAAKLL RTSIGTDLTD AQVKEVCLVI ESVGALAAVE SRIDTLTRRA LDILNSAPID VQAKAGLAEL ARMAANRSA
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