Gene Mvan_3519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3519 
Symbol 
ID4649209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3741749 
End bp3742438 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content73% 
IMG OID639806996 
Producthypothetical protein 
Protein accessionYP_954320 
Protein GI120404491 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00355999 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0410879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCA CCCGCGCCGG GGGGGTCTCC AAACCGCCGT TTGCGACCTT CAACCTCGGC 
GATCACGTGG GCGACGACCC CGAGGCGGTC GCGGCCAACC GGCGCCGACT GTCGGCAGCC
GTCGGGCTGG GGGACAACAT CGTCTGGATG AACCAGGTGC ACAGTGCCAA TGTCGCCGTC
GTCGACCACG GCGGCGAGAC CGTCGATGCC ACAGACGGTT TGGTCACCAC GGTGCCGCGG
CTGGCGCTCG CGGTGGTGAC CGCCGACTGC GTGCCGGTGT TGATGGCCGA CGCGCGCGCC
GGGGTGGTCG CCGCGGTGCA CGCCGGCCGG GTGGGCGCCG CCGCAGGCAT CGTCGCGCGG
GCGCTGAAAA CCATGACCGA CGCGGGTGCC CGCGTCGAAG ACGTCTCGGT GCTGCTGGGC
CCCGCAGTCA GTGGTCGCAA CTACGAGGTG CCCGAGGCGA TGGCCGCCGA GGTCGAGCAG
GCGTTGCCCG GCAGCCGTAC CACCACCGGC CGGGGGACGC CGGGGCTGGA TCTCCGCGCG
GGCATCGCGA CCCAGCTGCG CGCGCTGGGT GTGCGGTCGG TGGACGTCGA CCCGCGGTGC
ACGGTCGACG ATCCCAACCT GTTCAGTCAC CGGCGCGACG CCCCGACCGG GCGCCTGGCC
TCGCTGATCT GGCTGGAGCC CGCGACATGA
 
Protein sequence
MTTTRAGGVS KPPFATFNLG DHVGDDPEAV AANRRRLSAA VGLGDNIVWM NQVHSANVAV 
VDHGGETVDA TDGLVTTVPR LALAVVTADC VPVLMADARA GVVAAVHAGR VGAAAGIVAR
ALKTMTDAGA RVEDVSVLLG PAVSGRNYEV PEAMAAEVEQ ALPGSRTTTG RGTPGLDLRA
GIATQLRALG VRSVDVDPRC TVDDPNLFSH RRDAPTGRLA SLIWLEPAT