Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3519 |
Symbol | |
ID | 4649209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 3741749 |
End bp | 3742438 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639806996 |
Product | hypothetical protein |
Protein accession | YP_954320 |
Protein GI | 120404491 |
COG category | [S] Function unknown |
COG ID | [COG1496] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00355999 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0410879 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCACCA CCCGCGCCGG GGGGGTCTCC AAACCGCCGT TTGCGACCTT CAACCTCGGC GATCACGTGG GCGACGACCC CGAGGCGGTC GCGGCCAACC GGCGCCGACT GTCGGCAGCC GTCGGGCTGG GGGACAACAT CGTCTGGATG AACCAGGTGC ACAGTGCCAA TGTCGCCGTC GTCGACCACG GCGGCGAGAC CGTCGATGCC ACAGACGGTT TGGTCACCAC GGTGCCGCGG CTGGCGCTCG CGGTGGTGAC CGCCGACTGC GTGCCGGTGT TGATGGCCGA CGCGCGCGCC GGGGTGGTCG CCGCGGTGCA CGCCGGCCGG GTGGGCGCCG CCGCAGGCAT CGTCGCGCGG GCGCTGAAAA CCATGACCGA CGCGGGTGCC CGCGTCGAAG ACGTCTCGGT GCTGCTGGGC CCCGCAGTCA GTGGTCGCAA CTACGAGGTG CCCGAGGCGA TGGCCGCCGA GGTCGAGCAG GCGTTGCCCG GCAGCCGTAC CACCACCGGC CGGGGGACGC CGGGGCTGGA TCTCCGCGCG GGCATCGCGA CCCAGCTGCG CGCGCTGGGT GTGCGGTCGG TGGACGTCGA CCCGCGGTGC ACGGTCGACG ATCCCAACCT GTTCAGTCAC CGGCGCGACG CCCCGACCGG GCGCCTGGCC TCGCTGATCT GGCTGGAGCC CGCGACATGA
|
Protein sequence | MTTTRAGGVS KPPFATFNLG DHVGDDPEAV AANRRRLSAA VGLGDNIVWM NQVHSANVAV VDHGGETVDA TDGLVTTVPR LALAVVTADC VPVLMADARA GVVAAVHAGR VGAAAGIVAR ALKTMTDAGA RVEDVSVLLG PAVSGRNYEV PEAMAAEVEQ ALPGSRTTTG RGTPGLDLRA GIATQLRALG VRSVDVDPRC TVDDPNLFSH RRDAPTGRLA SLIWLEPAT
|
| |