Gene Mvan_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3400 
Symbol 
ID4645010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3615359 
End bp3616168 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content71% 
IMG OID639806877 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_954202 
Protein GI120404373 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.213114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.431531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC TGACCGTCAC CGTCGGCGAT GGTGTCGCGG TACTCACCCT CGACCGGCCG 
GACCGGCGCA ACGCCTATAC CGCCCGGATG GGAGAGCTGC TCAGCGCCGC CTACCGGGAC
TGTGACGAGG ACGACGGAGT CCGTGCCATC GTGCTCACCG GGGCGGGCGA CGCGTTCTGC
GTCGGCGCCG ATTTCGGTGC GCAGGAAGAC CCGTTCGCGT CCACCACCGC CGCGTTCACC
GCATCACCCG TCGACCCCGC CGCGTTCGAA CTCCGGACCC CCGTGATAGC CGCCGTCAAC
GGACACGCGA TCGGCATCGG ACTGACCCTG GCGCTGCAGT CCGACATTCG CATCATGGCT
GCCGATGCCA AATACGCTGT GGCTCAGGCA CGCCGCGGGG TCATCGGGGA CTGCATGTCG
CACTGGACCC TGCCGCACCT GGTCGGCGGC GCCGTCGCCG CGGATCTGCT GCTGACCGGC
CGCACCTTCG ACGGCGCGGA GGCGGCCGCG ATGGGCGTCG CCTCGCGTTG TGTGCCCGCC
GCGCGGGTGC TCGACGAAGC CATGGTGATC GCGCGCGACA TCGCGACCAA CGTCGCACCG
ATGTCGGCGG CGCTGAGCAA GCGGCTGCTC TGGGACACCA TGGCCAGGGG ATACGGCCCC
CGCCAGGTGG CGACGCTGGA GACCGCGGCG CACCACCGCG TGATGGGCGG TGCGGACGCC
CGGGAGGGTG TCGCGGCGTT TCTCGAGCGC CGCACCCCCC GGTGGAGTTC GTCGGTGTCG
AAGGAGTGGG AGCCGCTGCG CGAGATCTAG
 
Protein sequence
MTDLTVTVGD GVAVLTLDRP DRRNAYTARM GELLSAAYRD CDEDDGVRAI VLTGAGDAFC 
VGADFGAQED PFASTTAAFT ASPVDPAAFE LRTPVIAAVN GHAIGIGLTL ALQSDIRIMA
ADAKYAVAQA RRGVIGDCMS HWTLPHLVGG AVAADLLLTG RTFDGAEAAA MGVASRCVPA
ARVLDEAMVI ARDIATNVAP MSAALSKRLL WDTMARGYGP RQVATLETAA HHRVMGGADA
REGVAAFLER RTPRWSSSVS KEWEPLREI