Gene Mvan_3219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3219 
Symbol 
ID4647619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3429037 
End bp3430224 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content71% 
IMG OID639806695 
Productmajor facilitator superfamily transporter 
Protein accessionYP_954026 
Protein GI120404197 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAGT CCGACCGCGC CGACCGGCGC TCGGTGCTGC TCACTCTGTG CCTCACCGAG 
ATCACCAGCT GGGGGGTGCT GTACTACGCG TTCTCGGTGC TGTCACCGGC CATCTGCGCG
GACACCGGCT GGTCCGCGCC GGCGGTGACG GCAGCGTTCT CCGCGGGCCT GGTGATCTCC
GCGCTGCTGG GGATTCCGGT GGGGCGCTGG CTGGACCGCC ACGGCCCCCG CTGGATCATG
ACGGGCGGGT CGGTGCTCGG ATCGATCGCA CTGGCCGGCG TCGCAGCCGC ACCCGACGTC
GTATCTTTCA CCGCGGCATG GGTTGTCGCC GGCGTAGCGA TGAGCGCAGT GTTCTACGCT
CCGGCGTTCG CCGCGCTGAC ACGCTACTTC CGCCCCGATG CGGTCCGCGC GCTGACCGCC
CTGACGCTGG CGGCGGGCCT GGCCAGCACG GTGTTCGCAC CGTTGACCGC GGCGATATCG
GCGCACATGG ACTGGCGCGA AACCTATCTC GTCCTGGCCG CCGCGATGGC CGTCATCACC
GTCCCCGCGC ATTTCTTCGG CCTGCGCCGG CCGTGGCCCC ACATCGAGCA CCACCATCTG
GTCGAGCCGC CGACCCGCAT CGCGCGCAGC CGCCAATTCG TCGCCCTCAC CGTGGCATTC
GCGATGGCCG GGCTGGCCTC CTACGCCGTG ATCGTCAATC TGGTGCCGCT GATGACGGCG
CACGGAATCA GCACGCAGGC CGCCGCGCTC GCCCTCGGAC TAGGCGGCGC CGGCCAGGTT
CTCGGGCGGC TCGGCTACCA GCGGATGGTC CGGCACCTCA GCGTCGTTCC GCGCACCGCG
CTGATCATGG CCGGCGTCGC GGTCACCACT GCGCTGCTCG GGTTGCTCAC GTCGGTGGCC
ACCCTGATCA CCGTGGCCGT CGTGGCCGGC GTCGTCCGAG GCGTGATGAC GTTGCTGCAG
GCCACCGCGG TGACCGAACG GTGGGGCATC ACCCATTACG GGCAGCTCAG CGGTATTCTG
TCCGCGCCCG TCATGCTGAG CACCGCGCTG GGACCCTTCG TCGGCGCGGG ATTGGCCACC
CTGCTGGGAG GCTACGGGGC GATGTTCGTG GTGCTCGGGG CGGTCGCGCT CGCCGCCGCG
CTGCTTGCCA CCGCGACGCG GGTCAGACCG GTGGATGCTG ACGGGTGA
 
Protein sequence
MAESDRADRR SVLLTLCLTE ITSWGVLYYA FSVLSPAICA DTGWSAPAVT AAFSAGLVIS 
ALLGIPVGRW LDRHGPRWIM TGGSVLGSIA LAGVAAAPDV VSFTAAWVVA GVAMSAVFYA
PAFAALTRYF RPDAVRALTA LTLAAGLAST VFAPLTAAIS AHMDWRETYL VLAAAMAVIT
VPAHFFGLRR PWPHIEHHHL VEPPTRIARS RQFVALTVAF AMAGLASYAV IVNLVPLMTA
HGISTQAAAL ALGLGGAGQV LGRLGYQRMV RHLSVVPRTA LIMAGVAVTT ALLGLLTSVA
TLITVAVVAG VVRGVMTLLQ ATAVTERWGI THYGQLSGIL SAPVMLSTAL GPFVGAGLAT
LLGGYGAMFV VLGAVALAAA LLATATRVRP VDADG