| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3054 |
|---|
| Symbol | |
|---|
| ID | 4643275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 3219547 |
|---|
| End bp | 3221148 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639806531 |
|---|
| Product | xanthine/uracil/vitamin C permease |
|---|
| Protein accession | YP_953862 |
|---|
| Protein GI | 120404033 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.951228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.199376 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG ACGTCACCAA CCCGCCCGCC GATCCGATCG AACCTCCGGC CGCCAAGCCG
CCCGTGCTCG CGTGGTGGAC CCGCGGCGAC ACCAACGCGT TCTTCGGCCT CGGATTCAAC
ATTCTGGTCA ATGTTCTTAC GTTGACGGGA TTGATGATCG GGGTCGTCGC CGTCCCCGCC
GACGACGTGC TCGGCACCGT GCTGCCCGCA CTGGGAGTCG CCCTCATTCT CGGGAACCTG
TACTACACGT TCCTGGCGCG GCGACTCGCC AAGCGGGAGA ACAGATCCGA TGTCACCGCG
CTCCCCTACG GCCCCAGCGT GCCGCACATG TTCATCGTCG TGTTCGTGGT CATGCTGCCG
GTGTACCTGG CCACGGACGA CCCGACGCAG GCGTGGCAGG CGGGTCTGGC GTGGGCCTTC
CTGATCGGTG TCATCGTGAT GATCGGCGCC TTCGTCGGCC CGTACATCCG CAAGCTGACA
CCGCGCGCGG CGATGCTCGG CACGCTGGCC GGCATCTCGA TCACCTTCAT CTCGATGCGG
CCCGCCGCCC AGATGTGGGA GGTGGCCTGG ATCGGTCTGC CCGTGCTGGC CATCATCCTG
ATCGGGTTCT TCACCGACGT GAAACTTCCG GGCGGCGTTC CGATCGGACT GGTGGCGCTG
CTGGTCGGCA CCGCGATCGG TTGGGCGGGC GGCTACATGT CGGCGCCCGA CGTCGGTCAG
GCGTTCAGCG ACATCGCCAT CGGCATCCCG GACCTGCGGA TCGACATGCT GTTCAACGGC
CTTGCCGACC TCGCACCGCT GCTCGGTACC GCGATCCCGC TCGGCGTGTA CAACTTCACC
GAGGCGATGA GCAACGTCGA GAGCGCCGCC GCCGCCGGCG ACAACTACAA CCTGCGCAGC
GTGCTGCTCG CCGACGGCGC GGGCGCGGTC ATCGGATCGG CGTTCGGCTC ACCGTTCCCG
CCCGCCGTCT ACATCGGTCA TCCTGGTTGG AAGGACGCCG GCGGCCGCGC GGGTTACTCG
TTGGCCAGCG GCGCGGTGAT CGGCATCTTC TGCTTCGTCG GCCTTTTCGG TGTGCTGGCG
GCATTGTTGC CGGTTCCGGC CATCGTCCCG ATCCTGCTGT ACATCGGCCT GCTGATCGGC
GCCCAGGCCT TCCAGGCGGT GCCGCGGTTG CATGCCGTGG CTGTGGTGGC TGCGCTGCTG
CCCAACCTGG CCGAGTGGGG ACGGGGCATG ATCGACAACG CCCTCAGTGC CGCCGGGACA
TCGGCCGCCG AAGTGACCGC CGACGCGCTC AACGGCGCAG GGGTGGTCTA CGAAGGCCTG
AAGACGCTCG GTGAGGGGGC GGTGCTCGTC GGACTGATCC TCGGCACCAT GGTCACCTAC
ATCCTCGACA AGAAATTCCT CCACGCCGCG GCCGCTTCGG CGGTGGGAGC GGCGCTGTCC
TTCATCGGTT TGATCCACGC GCCCGAGGTG GCATGGGCGG CCAGTCCCCA AGTGGCCCTT
GGCTATCTGC TCTTCGGCGG GGTGTGCGTG GCATTCTGGT TCCTGCCCGG GGCCAAGGAA
CCGGTCGTCG TGGACGAGGC CGACATCGTC GCCGGCCACT GA
|
|---|
| Protein sequence | MSTDVTNPPA DPIEPPAAKP PVLAWWTRGD TNAFFGLGFN ILVNVLTLTG LMIGVVAVPA
DDVLGTVLPA LGVALILGNL YYTFLARRLA KRENRSDVTA LPYGPSVPHM FIVVFVVMLP
VYLATDDPTQ AWQAGLAWAF LIGVIVMIGA FVGPYIRKLT PRAAMLGTLA GISITFISMR
PAAQMWEVAW IGLPVLAIIL IGFFTDVKLP GGVPIGLVAL LVGTAIGWAG GYMSAPDVGQ
AFSDIAIGIP DLRIDMLFNG LADLAPLLGT AIPLGVYNFT EAMSNVESAA AAGDNYNLRS
VLLADGAGAV IGSAFGSPFP PAVYIGHPGW KDAGGRAGYS LASGAVIGIF CFVGLFGVLA
ALLPVPAIVP ILLYIGLLIG AQAFQAVPRL HAVAVVAALL PNLAEWGRGM IDNALSAAGT
SAAEVTADAL NGAGVVYEGL KTLGEGAVLV GLILGTMVTY ILDKKFLHAA AASAVGAALS
FIGLIHAPEV AWAASPQVAL GYLLFGGVCV AFWFLPGAKE PVVVDEADIV AGH
|
|---|
| |