Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3000 |
Symbol | |
ID | 4648528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 3168897 |
End bp | 3169643 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639806480 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_953811 |
Protein GI | 120403982 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.767749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.280666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGACGCG TGGACGGAAA AGTGGCACTC ATCAGTGGCG GCGCGCAGGG AATGGGCGCC GCCGATGCCC GGGCGCTGAT CGCCGAAGGC GCCAAGGTCG TCATCGGTGA CATCCTCGAC GACAAGGGCA AGGCGCTGGC GGACGAGATC AACGCCGAGA CACCCGACTC GATCCGTTAC GTGCATCTCG ACGTCACCCA GGCCGACCAG TGGGAGGCCG CCGTGGCCAC CGCTGTCGAC GCGTTCGGCA AGCTCAACGT GCTTGTCAAC AATGCGGGCA CGGTGGCGCT GGGGCAGATC GGCCAGTTCG ATATGGCCAA GTGGCAGAAG GTCATCGACG TCAACCTCAC CGGCACGTTC CTCGGAATGC AGGCGTCCGT CGAGGCGATG AAGACCGCGG GCGGCGGGTC GATCATCAAC ATCTCCTCCA TCGAGGGTCT GCGCGGTGCG GTCATGGTGC ACCCGTACGT GGCGTCCAAG TGGGCGGTGC GCGGCCTCAC GAAGTCCGCG GCCCTCGAGC TCGGGTCACA CAACATCCGG GTCAACTCGG TGCACCCCGG CTTCATCCGC ACCCCGATGA CCAAGCACTT CCCGGACAAC ATGCTGCGCA TCCCGCTGGG CCGCCCGGGT CAGCCCGAAG AGGTCGCCAC CTTCGTGGTG TTCCTGGCCA GCGACGAGTC GCGGTACGCG ACAGGCGCCG AATTCGTGAT GGACGGCGGC CTGACCAACG ACGTTCCGCA CAAGTAG
|
Protein sequence | MGRVDGKVAL ISGGAQGMGA ADARALIAEG AKVVIGDILD DKGKALADEI NAETPDSIRY VHLDVTQADQ WEAAVATAVD AFGKLNVLVN NAGTVALGQI GQFDMAKWQK VIDVNLTGTF LGMQASVEAM KTAGGGSIIN ISSIEGLRGA VMVHPYVASK WAVRGLTKSA ALELGSHNIR VNSVHPGFIR TPMTKHFPDN MLRIPLGRPG QPEEVATFVV FLASDESRYA TGAEFVMDGG LTNDVPHK
|
| |