Gene Mvan_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2942 
Symbol 
ID4649148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3116686 
End bp3117408 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content69% 
IMG OID639806423 
Productregulatory protein GntR, HTH 
Protein accessionYP_953754 
Protein GI120403925 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0684718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.415025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTC GACCGGTCAA CCGTCGCTCG GTACCCGAGG ACGTCTTCGA CCAGATCATC 
AGCGATGTCC TCAGCGGTGA GATGCGGCCC GGCGAGACGC TGCCGAGCGA GCGGCGGCTC
GCCGAGGTGT TGGGGGTATC GCGGCCCGCG ATTCGCGAGG CGCTCAAGCG CCTGGCCGCT
GCGGGGCTGA TCGAGGTTCG TCAGGGTGAT GCCACCACAG TGCGCGACTT CCGGCGTACC
GCGGGGCTCG ACCTGCTCCC CCGGCTGCTG ATCCGTGATG GCGACCTCGA CCTCGCCGTC
GTCCGCAGCA TCCTCGAGAC CAGGTTGCAC AACGGGCCCA AGGTGGCCGA GCTCGCCGCG
CAGCGTCGGG GCCCCGAACT GTCAGATGAG TTGAACACCG CCATGCGGGC CCTCGCGGAT
GAAGCCGATC CTGTTGCCGC GCAACGGCAT GCGCTGGACT TCTGGGATCA CATCGTCGAT
GGCGCCGACT CGATCGCGTT CCGGCTGATG TTCAACACGT TGCGTGCCAC CTATGAGCCG
GCACTGCCCG CCCTGGCCAC GATGATGGCC GCCGAGGTCG GGCGTGTGGA CGCCTACCGT
GCGGTGGCCG AGGCGGTCCT GGCAGGAGAT CCGGCCGCAG CGCGCGACAA TGCCCACCGC
CTTCTGGAAC CCGCGACCAC CGCCCTGCTG GATGCACTGC ACACCCTGGA GGAACCCCGA
TGA
 
Protein sequence
MALRPVNRRS VPEDVFDQII SDVLSGEMRP GETLPSERRL AEVLGVSRPA IREALKRLAA 
AGLIEVRQGD ATTVRDFRRT AGLDLLPRLL IRDGDLDLAV VRSILETRLH NGPKVAELAA
QRRGPELSDE LNTAMRALAD EADPVAAQRH ALDFWDHIVD GADSIAFRLM FNTLRATYEP
ALPALATMMA AEVGRVDAYR AVAEAVLAGD PAAARDNAHR LLEPATTALL DALHTLEEPR