Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_2942 |
Symbol | |
ID | 4649148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 3116686 |
End bp | 3117408 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639806423 |
Product | regulatory protein GntR, HTH |
Protein accession | YP_953754 |
Protein GI | 120403925 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0684718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.415025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTTC GACCGGTCAA CCGTCGCTCG GTACCCGAGG ACGTCTTCGA CCAGATCATC AGCGATGTCC TCAGCGGTGA GATGCGGCCC GGCGAGACGC TGCCGAGCGA GCGGCGGCTC GCCGAGGTGT TGGGGGTATC GCGGCCCGCG ATTCGCGAGG CGCTCAAGCG CCTGGCCGCT GCGGGGCTGA TCGAGGTTCG TCAGGGTGAT GCCACCACAG TGCGCGACTT CCGGCGTACC GCGGGGCTCG ACCTGCTCCC CCGGCTGCTG ATCCGTGATG GCGACCTCGA CCTCGCCGTC GTCCGCAGCA TCCTCGAGAC CAGGTTGCAC AACGGGCCCA AGGTGGCCGA GCTCGCCGCG CAGCGTCGGG GCCCCGAACT GTCAGATGAG TTGAACACCG CCATGCGGGC CCTCGCGGAT GAAGCCGATC CTGTTGCCGC GCAACGGCAT GCGCTGGACT TCTGGGATCA CATCGTCGAT GGCGCCGACT CGATCGCGTT CCGGCTGATG TTCAACACGT TGCGTGCCAC CTATGAGCCG GCACTGCCCG CCCTGGCCAC GATGATGGCC GCCGAGGTCG GGCGTGTGGA CGCCTACCGT GCGGTGGCCG AGGCGGTCCT GGCAGGAGAT CCGGCCGCAG CGCGCGACAA TGCCCACCGC CTTCTGGAAC CCGCGACCAC CGCCCTGCTG GATGCACTGC ACACCCTGGA GGAACCCCGA TGA
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Protein sequence | MALRPVNRRS VPEDVFDQII SDVLSGEMRP GETLPSERRL AEVLGVSRPA IREALKRLAA AGLIEVRQGD ATTVRDFRRT AGLDLLPRLL IRDGDLDLAV VRSILETRLH NGPKVAELAA QRRGPELSDE LNTAMRALAD EADPVAAQRH ALDFWDHIVD GADSIAFRLM FNTLRATYEP ALPALATMMA AEVGRVDAYR AVAEAVLAGD PAAARDNAHR LLEPATTALL DALHTLEEPR
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