Gene Mvan_2828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2828 
Symbol 
ID4646485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2999949 
End bp3001511 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content72% 
IMG OID639806309 
ProductABC transporter, transmembrane region, type 1 
Protein accessionYP_953641 
Protein GI120403812 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components 
TIGRFAM ID[TIGR02857] thiol reductant ABC exporter, CydD subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.328369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGGT TCCTGATCGC CACCACGGCC TGCGGAGTGC TCATCGCTGC GTGCACCATC 
GCCTCGGCGG TCGTGCTCGC GGGCATCGTC GCGCGGGTGA TCACCGACCC CGCCTCACGC
AGCGTCGGCG AGCTCAGCAC CCCGATCGCA ATACTGTTGG CGCTGTGGGT GTTTCGGGCG
CTGGCTCAGT GGCGGCAGGG CAGGCTCGGG CAGCACGGGG CCAGCGCGGT GATCGCCGAC
CTCAGCGATC AGGTGCTGAC GACGGCCACG TCGCTGCCCC CGCGCCAACT CGCCGCGCAC
CGGGACGAGG CGGCCGTGGT GATCACCCGC GGGCTCGACG GCCTGCGGGT GTACTTCACC
ACCTACCTGC CGTCGCTGTT CCTGGCCGCC GTCTTGACCC CCGCGACCGC CGTCGTCATC
GCGTTCTACG ACTGGAAGTC CGCCCTTATC GTGACGATCG CGCTGCCGCT CATCCCGGTC
TTCATGGTCC TGATCGGACT CGCGACCGCG GATCGGTCGG CGGCCGCGCT GGCCGCGATG
GCGACACTGC AGTCCCGTCT ACTCGACCTT GTCGCGGGCC TGCCCACCCT GCGTGCGCTC
GGTCGCACCG GGGGCGCTGC CGCGCGCATA GCCGAACTCG GTGCGGCGCA CCGCCGTTCC
GCCATGGCGA CGATGCGGAT CGCGTTCCTG TCGGCGCTTG TGCTCGAGCT CCTCGCCACG
CTGGGGGTGG CACTGGTGGC GGTCGGCGTC GGCATGAGGC TCGTCTACGG CGAGATGACC
CTGTCGGCGG GGCTGACCGC GTTGCTGCTC GCACCGGAGG TGTTCTGGCC GCTGCGCCGG
GTCGGGGCCG CCTTCCACTC CGCCCAGGAC GGCAAGACGG CCTTGCAGGC GGCGTTCCGT
TTCATCGACA CCGCGGAACC GCCCGGGGCG GGGACGCTCG GCGTGCCCGG CGACAGCGTG
ACCGTCGAGG TCGACGACCC GGAGCTGACC GCAGGGCCCG GCCGCGTCAC CGTGCTGACC
GGGCCCAACG GGATCGGCAA ATCCACCCTG TTGCAGGCGA TTCTGGGACT GGACCGGCCC
ACCGGGGGAG GAATCAGGAT CAACGGGGTG GAGGTGGCCG AACTCGACCC GCAGCAGTGG
TGGCCGAAGG TCGCCTGGCT GGCACAACGG CCGGTGCTGA TCCCCGGCAC GGTGCAGGAG
AACCTCGAGC TGTTCGGCCC GCTGCCCGAT CTGCGGTCGG CGTGCCGCGC CGCCTGCTTC
GACGAGGTCC TCGCCACCCT GCCCGACGGT CTGCAGACGG TGATCGGGCG CGGCGGCGTC
GGCTTGTCCC TCGGCCAGCG GCAACGGCTG GGCCTGGTGC GGGTGCTCGG GTCCGCGGCG
CCCCTGTTGT TGTTCGACGA ACCCACCGCA CACCTCGACG GGCCCACCGA GGCCCGGGTT
CTGGACGCGA TCACACGTCG CGCCGCCGAC GGCGCGACGG TGGTCGTGGT CGGGCACCGT
GATCCGATTC TGGAGATCGG CGACGCCGTG GTCCGGATGG GAGGCGCCCG TGTCGCGCCG
TGA
 
Protein sequence
MRRFLIATTA CGVLIAACTI ASAVVLAGIV ARVITDPASR SVGELSTPIA ILLALWVFRA 
LAQWRQGRLG QHGASAVIAD LSDQVLTTAT SLPPRQLAAH RDEAAVVITR GLDGLRVYFT
TYLPSLFLAA VLTPATAVVI AFYDWKSALI VTIALPLIPV FMVLIGLATA DRSAAALAAM
ATLQSRLLDL VAGLPTLRAL GRTGGAAARI AELGAAHRRS AMATMRIAFL SALVLELLAT
LGVALVAVGV GMRLVYGEMT LSAGLTALLL APEVFWPLRR VGAAFHSAQD GKTALQAAFR
FIDTAEPPGA GTLGVPGDSV TVEVDDPELT AGPGRVTVLT GPNGIGKSTL LQAILGLDRP
TGGGIRINGV EVAELDPQQW WPKVAWLAQR PVLIPGTVQE NLELFGPLPD LRSACRAACF
DEVLATLPDG LQTVIGRGGV GLSLGQRQRL GLVRVLGSAA PLLLFDEPTA HLDGPTEARV
LDAITRRAAD GATVVVVGHR DPILEIGDAV VRMGGARVAP