| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2569 |
|---|
| Symbol | |
|---|
| ID | 4643814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 2710836 |
|---|
| End bp | 2711429 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639806052 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_953384 |
|---|
| Protein GI | 120403555 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.498768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCAAGA TTCCGCCCGG TCCGCGAGAC GAACGCGGAG TGCTGTCGAG TCGCATCCTC
GTCGCGGCGC GTGGGGCGTT CGCCGACACG GGTTACGCGG GGACGACGAT CCGGGCGGTG
GCCCGCGCCG CCGACGTCGA CCCGGCGCTC GTGTACCACT ACTTCGGATC GAAGGAGGCG
CTGCTCGACG CGGCGACCGA TCCGCCGCAA CGCTGGCTGC AGAATGTGGC GAGGGCGTGG
ACCACACCCG TGCCGCAACT GGGGGCGGCG CTCGTGCGGC TGATGCTTGA CGCGTGGGCC
GACGAAGAGA TCGGGCCGGT GTTGCGGGCG ATCCTGCAGA CCGCTGCCCA CGAGGCGGCG
ACGCGGGAGA AGTTGCGGCT CGTCGTGGAA CGAAGTCTGA TGGGGGTCTC CCAGCTGGGC
GTCGACGAAC GCGACCGCAT GCTGCGCAGC GGCCTGATCT CGTCGCAGAT CATGGGGCTG
GCGATGATGC GCTACGTCTG GCGCATCGAG CCCGTCGCAT CGATGGACGA CGACGAACTC
GTCGCCGCGG TGGCGCCGAA CCTGCAGCGC TACATCTCCG ACGACCTGGG GTGA
|
|---|
| Protein sequence | MSKIPPGPRD ERGVLSSRIL VAARGAFADT GYAGTTIRAV ARAADVDPAL VYHYFGSKEA
LLDAATDPPQ RWLQNVARAW TTPVPQLGAA LVRLMLDAWA DEEIGPVLRA ILQTAAHEAA
TREKLRLVVE RSLMGVSQLG VDERDRMLRS GLISSQIMGL AMMRYVWRIE PVASMDDDEL
VAAVAPNLQR YISDDLG
|
|---|
| |