| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2548 |
|---|
| Symbol | |
|---|
| ID | 4645429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 2688838 |
|---|
| End bp | 2689488 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639806033 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_953365 |
|---|
| Protein GI | 120403536 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.971783 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAAGG TTTTCCTGGT AGACGACCAC GAAGTGGTCC GGCGCGGACT GATCGACCTG
CTCAGCAGTG ACCCCGAACT CGACGTGGTC GGCGAGGCGG GATCCGTTGC CGAGGCGCTG
GCGCGCATCC CTGCGCTACA GCCCGACGTC GCGGTACTCG ACGTCCGCCT GCCCGACGGC
AACGGCATCG AGTTGTGTCG GGACCTGCTC TCCCGGCTTC CCGACCTGCG CTGCCTGATG
TTGACCTCAT TCACCTCCGA CGAGGCGATG CTCGACGCGA TCCTCGCCGG CGCCAGCGGC
TACGTGGTGA AGGACATCAA GGGGATGGAA CTGGCCCAGG CCATCAAAGA CGTCGGGTCG
GGCCGCTCCC TGCTCGACAA CCGGGCCGCC GCGGCGCTGA TGGCCCGGCT GCGCGGTGAG
GGTGAGCGCA CCGACCCGCT GTCCGGCCTG ACCGAACAGG AGCGCGTGCT GCTCGGCCTG
CTCGGTGAGG GCCTGACCAA CAAGCAGATC GCGGCCCGGA TGTTCCTCGC CGAGAAGACG
GTCAAGAACT ACGTGTCCCG GCTACTGGCC AAGTTGGGCA TGGAGCGCCG CACCCAGGCC
GCGGTGTTCG TGTCCAAGCT CGAGCGCCAC CATCGGCCGG ACGGCGAATA G
|
|---|
| Protein sequence | MVKVFLVDDH EVVRRGLIDL LSSDPELDVV GEAGSVAEAL ARIPALQPDV AVLDVRLPDG
NGIELCRDLL SRLPDLRCLM LTSFTSDEAM LDAILAGASG YVVKDIKGME LAQAIKDVGS
GRSLLDNRAA AALMARLRGE GERTDPLSGL TEQERVLLGL LGEGLTNKQI AARMFLAEKT
VKNYVSRLLA KLGMERRTQA AVFVSKLERH HRPDGE
|
|---|
| |