Gene Mvan_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2078 
Symbol 
ID4646578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2216201 
End bp2217784 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content65% 
IMG OID639805561 
Productamino acid permease-associated region 
Protein accessionYP_952899 
Protein GI120403070 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.491472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.478353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACTG ATTCCGCAGC AGTCGAGACC GCTGCACCGG CGGGGCTGAA GAAGGGTGCG 
ATCGGCATGG TCGCCGTCAT CTTCATGGCC GTCGCCAATG CGGCGCCGAT CACAGCGATG
ACCGGCAACG TACCGATCGC GGTCGGATTC GGTAACGGCC TGGGAGCGCC GGCGGGCTTC
CTGTTCGCGA CGATCGCGCT GACACTGTTC GCGCTCGGCT ATGTCGCGAT GGCCCGGCAC
ATCACGACCA CGGGCGCGTT CTACGGCTTC ATCTCTCACG GCCTCGGTCA GGTATGGGGC
ATGGCCAGTG GCTTCCTGGC GACGTTCGCG TACGTGGTGT TCGAGGGTTC CCTCATCGGC
GGTTGTGCGT ACTTCGCCAA CGATGGGGTG AACACCATTG CGGGAGTGGA CATCCCGTGG
TTGGTGTTCG CGGTCGCCGC GGTCGTCGCC ATCGCCGCGC TGTGCCACTT CCACATCAGC
CTGACCGCGG CGATTCTCGG TGTCACGCTG GTGTCGGAGG TACTGATCCT GTTGGCGCTC
GCGTTCACCG TCATCTTCAG CGGCGGCGGC CCGGACGGTT TCATGCTCGA CAAGACGGTC
CTGCTCAACA ACGCGTTCAC CAGTCTTCCC GAAGGCGCTT TCGGTACGGC CGCGGCGGCC
GGGTCGATGG CGATCGGCCT GTTCTTTGCG TTCTGGTCGT GGGTCGGTTT CGAGACAACC
GCGGTCTACG GCGAGGAGTC CCGCAACCCG AAGAAGATCA TCCCGCGGGC GACGCTCATC
GCGGTGATCG GACTCGGCCT GTTCTACACG TTCATCTCGG CGATGGTGCT GGCAGGCAAC
GGCGCCAAGG CATCGGTGGA GGCTTCGATC AGCGCGTCAC CGCTGGACCT GTTCTTCAAC
CTGGTGGACG CCAACCTCGG CGGCTTCCTG CTCGACGTCT ACAAGATCCT GCTCGTCATC
GGATCGTTCG CGTGTGCGCT GGCCTTCCAC AACGCCGCCT CGCGCTACCT GTTCGCCCTG
GGCCGCGAGA TTCCCTCGGA CAAGGTGAAA TCGACGCTCG GCGCGGCGCA TCCCCGGCAC
GGGTCGCCCT ACATCGCCTC TGCCGTGCAG GCTCTGATCA CCATGGTGAT CGTGCTTCTG
TTCTTCGGCT TCACCGCGGT GCAGGTGCCC GACGCCACCG GCGTGCCCGT CGACACCCCG
TCGCTGGTCC CCTACACCAA CATCTACGGC CTGCTCGCGT TGATCGGGAC GGCGGCGATC
CTGCTGGTTC AGGCGATCTG CTCGGTCGCG GTGGTGTGGT ACTTCTGGGT GCGGAAAACC
CACCGCGGCA ACGTGTTGAC AACGTTGGTC TGCCCGGTGC TGGGCGCGTT GGCCATGGGC
TACGTGGTCT GGCTGCTGTG GGACAACCGC GCCTTCGCCG CCGGGTACGC CGCGAACTCG
CTGGTGTTCA AGAACGCACC CTTCTTCATC GCCGGGGTCT TTCTCGTCGG TCTTGGTTAT
GCACTCTGGC TGCGTCGTGC GCGGCCCGAG GTCTACGCCG AGATCGGGCG CACCGTGATG
GAGGACAGCC ACGAGCGCAG CTAG
 
Protein sequence
MSTDSAAVET AAPAGLKKGA IGMVAVIFMA VANAAPITAM TGNVPIAVGF GNGLGAPAGF 
LFATIALTLF ALGYVAMARH ITTTGAFYGF ISHGLGQVWG MASGFLATFA YVVFEGSLIG
GCAYFANDGV NTIAGVDIPW LVFAVAAVVA IAALCHFHIS LTAAILGVTL VSEVLILLAL
AFTVIFSGGG PDGFMLDKTV LLNNAFTSLP EGAFGTAAAA GSMAIGLFFA FWSWVGFETT
AVYGEESRNP KKIIPRATLI AVIGLGLFYT FISAMVLAGN GAKASVEASI SASPLDLFFN
LVDANLGGFL LDVYKILLVI GSFACALAFH NAASRYLFAL GREIPSDKVK STLGAAHPRH
GSPYIASAVQ ALITMVIVLL FFGFTAVQVP DATGVPVDTP SLVPYTNIYG LLALIGTAAI
LLVQAICSVA VVWYFWVRKT HRGNVLTTLV CPVLGALAMG YVVWLLWDNR AFAAGYAANS
LVFKNAPFFI AGVFLVGLGY ALWLRRARPE VYAEIGRTVM EDSHERS