Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_2078 |
Symbol | |
ID | 4646578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 2216201 |
End bp | 2217784 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639805561 |
Product | amino acid permease-associated region |
Protein accession | YP_952899 |
Protein GI | 120403070 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.491472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.478353 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACTG ATTCCGCAGC AGTCGAGACC GCTGCACCGG CGGGGCTGAA GAAGGGTGCG ATCGGCATGG TCGCCGTCAT CTTCATGGCC GTCGCCAATG CGGCGCCGAT CACAGCGATG ACCGGCAACG TACCGATCGC GGTCGGATTC GGTAACGGCC TGGGAGCGCC GGCGGGCTTC CTGTTCGCGA CGATCGCGCT GACACTGTTC GCGCTCGGCT ATGTCGCGAT GGCCCGGCAC ATCACGACCA CGGGCGCGTT CTACGGCTTC ATCTCTCACG GCCTCGGTCA GGTATGGGGC ATGGCCAGTG GCTTCCTGGC GACGTTCGCG TACGTGGTGT TCGAGGGTTC CCTCATCGGC GGTTGTGCGT ACTTCGCCAA CGATGGGGTG AACACCATTG CGGGAGTGGA CATCCCGTGG TTGGTGTTCG CGGTCGCCGC GGTCGTCGCC ATCGCCGCGC TGTGCCACTT CCACATCAGC CTGACCGCGG CGATTCTCGG TGTCACGCTG GTGTCGGAGG TACTGATCCT GTTGGCGCTC GCGTTCACCG TCATCTTCAG CGGCGGCGGC CCGGACGGTT TCATGCTCGA CAAGACGGTC CTGCTCAACA ACGCGTTCAC CAGTCTTCCC GAAGGCGCTT TCGGTACGGC CGCGGCGGCC GGGTCGATGG CGATCGGCCT GTTCTTTGCG TTCTGGTCGT GGGTCGGTTT CGAGACAACC GCGGTCTACG GCGAGGAGTC CCGCAACCCG AAGAAGATCA TCCCGCGGGC GACGCTCATC GCGGTGATCG GACTCGGCCT GTTCTACACG TTCATCTCGG CGATGGTGCT GGCAGGCAAC GGCGCCAAGG CATCGGTGGA GGCTTCGATC AGCGCGTCAC CGCTGGACCT GTTCTTCAAC CTGGTGGACG CCAACCTCGG CGGCTTCCTG CTCGACGTCT ACAAGATCCT GCTCGTCATC GGATCGTTCG CGTGTGCGCT GGCCTTCCAC AACGCCGCCT CGCGCTACCT GTTCGCCCTG GGCCGCGAGA TTCCCTCGGA CAAGGTGAAA TCGACGCTCG GCGCGGCGCA TCCCCGGCAC GGGTCGCCCT ACATCGCCTC TGCCGTGCAG GCTCTGATCA CCATGGTGAT CGTGCTTCTG TTCTTCGGCT TCACCGCGGT GCAGGTGCCC GACGCCACCG GCGTGCCCGT CGACACCCCG TCGCTGGTCC CCTACACCAA CATCTACGGC CTGCTCGCGT TGATCGGGAC GGCGGCGATC CTGCTGGTTC AGGCGATCTG CTCGGTCGCG GTGGTGTGGT ACTTCTGGGT GCGGAAAACC CACCGCGGCA ACGTGTTGAC AACGTTGGTC TGCCCGGTGC TGGGCGCGTT GGCCATGGGC TACGTGGTCT GGCTGCTGTG GGACAACCGC GCCTTCGCCG CCGGGTACGC CGCGAACTCG CTGGTGTTCA AGAACGCACC CTTCTTCATC GCCGGGGTCT TTCTCGTCGG TCTTGGTTAT GCACTCTGGC TGCGTCGTGC GCGGCCCGAG GTCTACGCCG AGATCGGGCG CACCGTGATG GAGGACAGCC ACGAGCGCAG CTAG
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Protein sequence | MSTDSAAVET AAPAGLKKGA IGMVAVIFMA VANAAPITAM TGNVPIAVGF GNGLGAPAGF LFATIALTLF ALGYVAMARH ITTTGAFYGF ISHGLGQVWG MASGFLATFA YVVFEGSLIG GCAYFANDGV NTIAGVDIPW LVFAVAAVVA IAALCHFHIS LTAAILGVTL VSEVLILLAL AFTVIFSGGG PDGFMLDKTV LLNNAFTSLP EGAFGTAAAA GSMAIGLFFA FWSWVGFETT AVYGEESRNP KKIIPRATLI AVIGLGLFYT FISAMVLAGN GAKASVEASI SASPLDLFFN LVDANLGGFL LDVYKILLVI GSFACALAFH NAASRYLFAL GREIPSDKVK STLGAAHPRH GSPYIASAVQ ALITMVIVLL FFGFTAVQVP DATGVPVDTP SLVPYTNIYG LLALIGTAAI LLVQAICSVA VVWYFWVRKT HRGNVLTTLV CPVLGALAMG YVVWLLWDNR AFAAGYAANS LVFKNAPFFI AGVFLVGLGY ALWLRRARPE VYAEIGRTVM EDSHERS
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