| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1935 |
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| Symbol | |
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| ID | 4648172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 2068010 |
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| End bp | 2069029 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639805422 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_952761 |
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| Protein GI | 120402932 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.49167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTG CGACCCAGGC GTGGGCGGGG TTGGCGGCGC TGGTGCTCGT CGGAGCCGCC
GCCACCGGCT GCGGCGGCCG GCAGGACGCC CCGACCGCGG ACTCGGGCGG CGAGATCACC
TGCGAGGTCG GCTCCGACAC CCGGGTGAGC ATCGCCACCG GCAACTCGAC GGGTGTGTAC
TTCTCGCTCG GCAACGCCTA CGCCGAGCAG ATCTCGGCCG CCACCGACGG CAGGGTCAAG
GCCACCGCCG CGGAGACCGG GGCGTCGGTG CAGAACATCC AGCAGCTTGT CGGCGGCAGC
TACCAGGTGG CCTTCTCCCT CGCCGACACC GCAGCCGACG CCGTCGAGGG CAAGGGCAGC
TTCGACGGGG AAAAGCAGCC CATCCAGGCG ATCTCACGCA TCTATCCGAA CTACACGCAG
GTGATCGCCA GAACGGACAG CGGTATCACG TCGATCGCGG ACATGCGTGG CAAGCGGGTG
TCCACCGGGT CGCCAGGGTC GGGCACCGAG GTCATCGCCA ACCGGCTGCT GCAATCGGCC
GGTCTGAATC CCGAATCCGA CGTTGCCGCA CAGCGACTCG ACCTGGCGAA GACCGTCGAT
GGGGTGAAAG ACGGCTCCAT CGATGCGTTG TTCTGGTCCG GTGGTCTCCC GACTCCGGGT
ATCACCGACC TGCTCACGAC GTCGCGCGAC GACGTCGTCT TCATCGACAT CACGCCACAG
CTGCCCAAGA TGTCGGAGAT CAGCCCCGCC TACGAGGAAG GCGTGATCCC TGCCGCCACC
TATCAGCTGC CCGCCGACGT CAAGACGATC GTCGTGCCGA ACATGCTGTT GGTGCGCGAG
GACCTCGACG CCAACCTGGC CTGCGTGCTG ACCAAGACCC TGTTCGAGAA GAAACCCGAA
CTGGAGCAGG TGGTCGGCGC GGCCAAGGGC ATCAACCTCG ACAACGCCCG AGACACCGAT
CCTGTGCCGC TCAACCGCGG CGCGCAGCAC GCCCTGGATC AACTCGGCGC GGCCGGCTGA
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| Protein sequence | MKRATQAWAG LAALVLVGAA ATGCGGRQDA PTADSGGEIT CEVGSDTRVS IATGNSTGVY
FSLGNAYAEQ ISAATDGRVK ATAAETGASV QNIQQLVGGS YQVAFSLADT AADAVEGKGS
FDGEKQPIQA ISRIYPNYTQ VIARTDSGIT SIADMRGKRV STGSPGSGTE VIANRLLQSA
GLNPESDVAA QRLDLAKTVD GVKDGSIDAL FWSGGLPTPG ITDLLTTSRD DVVFIDITPQ
LPKMSEISPA YEEGVIPAAT YQLPADVKTI VVPNMLLVRE DLDANLACVL TKTLFEKKPE
LEQVVGAAKG INLDNARDTD PVPLNRGAQH ALDQLGAAG
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