| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1920 |
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| Symbol | |
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| ID | 4648011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 2048639 |
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| End bp | 2050141 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639805407 |
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| Product | putative short chain dehydrogenase |
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| Protein accession | YP_952746 |
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| Protein GI | 120402917 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGAAC TTATTCGAAC GTCGGGGATC CCGTCACCCC TGCTAGTGGA GATGGGGTTC
ATGGAGAGCC CGTACGCTTC CCGGGTGAAC GCGATCGATC CGGACAAGCT CATCACCTGT
CTGCAGGTGC TGGCCGACAT CGAGGCCCTG CCTCCCGAGC ACCCCGATGC CGTCGCTGTC
CGCCGGGCCA CGGCCGGCAT CTTCAAATCG GTGAGAAAGG CTCGTCGCGC CGCCAAGCGC
GACGCCGTGG CCGCCGCCGA CGACGCCATC ACCGCGGCCA CCGCCACCGG TGCGCCCGGC
CGCATCGACG ACGAGACGCA GGGTCTGCCG CTGGTGTCCA CCACCGTCGG CGCCACCGCC
GGCACGCTGC TGCGTCCGCG CGCCTGCTAC ATCTGCAAGA ACCGGTACAC CGTGGTCGAC
GCGTTCTACC ACCAACTCTG CCCCGACTGC GCTGCCCTGA ACCGGGCCAA GCGCGACGCC
CGCACCGACC TCACCGGCAG GCGCGCCCTG CTCACCGGCG GTCGCGCCAA GATCGGCATG
TACATCGCCC TGCGACTGCT GCGCGACGGC GCCCACACCA CCATCACCAC CCGCTTCCCC
AACGATGCCG TGCGCCGTTT CGCAGCGATG CCCGACAGCG CCGACTGGCT GCACCGACTG
CGGATCGTCG GTATCGACCT GCGGGACCCG GCGCAGGTGG TCGCCCTCGC CGACGCCGTG
GCCGCGCAGG GCCCGCTGGA CATCCTGATC AACAACGCCG CGCAGACCGT GCGCCGGTCG
CCCGGTGCCT ATGCGGCACT CGTCGAGACG GAACGCACGC CGCCGCCGGA GATCGTGGAC
GTGCTGACGT TCGACCGGGT CAGCGACGCC CACCCGGCCG CGCTCGCCGG CAGCCTGGCC
GCAAACCCCA CTCCGCACCA GGTGGCCGAG CTGGCGCTGA CTGCCCGCAG CGCCTCCCCG
GACCGGATCG CCGCGGGCAC CGCCATCGAC GCGGGCGGCC TGCTGCCCGA CACGGCCCCG
GTGAACAGCT GGACCCAGCG GGTCCACGAG GTCGACGCGA TGGAACTGCT GGAGGTGCAG
CTGTGCAACC AGACCGCGCC GTTCATCCTG GTGAGCCGGC TGCGCCCGGC GATGGCCGCC
GCACCTGCGC GTCGCACCTA CGTCGTGAAT GTCTCCGCGA TGGAGGGTCA GTTCAGCCGG
GCATACAAGG GCCCGGGTCA TCCGCACACC AACATGGCCA AGGCCGCGCT GAACATGCTG
ACCCGCACGA GCGCCGGTGA GATGTTGGAG CGCGACGGCA TTCTGATGAC CGCCGTGGAC
ACCGGCTGGA TCACCGACGA GCGCCCGCAC CCGACGAAGC TGCGGCTCGC AGAGGAGGGG
TTTCACGCCC CGCTGGACCT GGTCGACGGG GCTGCGCGCG TGTACGACCC GATCGTGCGC
GGCGAGGCCG GCGAAGATCT GCACGGCTGC TTTTTGAAGG ACTACTCGCC GTCCAACTGG
TAG
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| Protein sequence | MSELIRTSGI PSPLLVEMGF MESPYASRVN AIDPDKLITC LQVLADIEAL PPEHPDAVAV
RRATAGIFKS VRKARRAAKR DAVAAADDAI TAATATGAPG RIDDETQGLP LVSTTVGATA
GTLLRPRACY ICKNRYTVVD AFYHQLCPDC AALNRAKRDA RTDLTGRRAL LTGGRAKIGM
YIALRLLRDG AHTTITTRFP NDAVRRFAAM PDSADWLHRL RIVGIDLRDP AQVVALADAV
AAQGPLDILI NNAAQTVRRS PGAYAALVET ERTPPPEIVD VLTFDRVSDA HPAALAGSLA
ANPTPHQVAE LALTARSASP DRIAAGTAID AGGLLPDTAP VNSWTQRVHE VDAMELLEVQ
LCNQTAPFIL VSRLRPAMAA APARRTYVVN VSAMEGQFSR AYKGPGHPHT NMAKAALNML
TRTSAGEMLE RDGILMTAVD TGWITDERPH PTKLRLAEEG FHAPLDLVDG AARVYDPIVR
GEAGEDLHGC FLKDYSPSNW
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