Gene Mvan_1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1895 
Symbol 
ID4645765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2019452 
End bp2020654 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content69% 
IMG OID639805383 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_952722 
Protein GI120402893 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGG GTCCGCTCGA CGGCATCCGG GTGATCGAGG TCGGCACGCT GATCTCGGGT 
CCGTTCGCGG GCCGGTTGCT CGGCGACATG GGTGCCGAGG TCATCAAGAT CGAGCCACCG
GGTGCCCCTG ATCCGCTGCG CACCTGGGGC CAGGCCGAAC TCGACGGCCA CCACTTTTTC
TGGACGGTCC ACGCGCGCAA CAAGAAAGCG GTGACGCTGA ACCTGCGGGT GCCCGAGGGC
CGGGAGCTGT TCCTGGATCT CGTCGAGCGC AGCGACGTGA TCGTCGAGAA TTTCCGGCCC
GGAACCCTGG AGAAGTGGGG ACTCGGGTAC GACGTGCTGC GCGAACGCAA TCGCGGCATC
ATCCTGGTGC GGGTGTCGGG TTACGGGCAG ACCGGTCCCG ACGCGCACAA GGCCGGCTAC
GCGTCGGTTG CCGAGGCGGC CAGCGGTCTG CGGCACATGA ACGGATTCCC GGGTGGGCCT
CCCCCACGTC TGGCGCTGTC GCTGGGCGAC AGCCTGGCGG GCATGTTCGC CGCCCAGGGC
GCACTGGCCG CGCTGTACCG CCGCTCCGTC ACCGGCGACG GCCAGGTCGT CGACGCAGCG
CTGACCGAGT CCTGCTTGGC GGTACAGGAA TCCACCATCC CCGACTATGA CGTCGGCGGC
GTGGTGCGGG GGCCGTCCGG CACCAGGCTG GAGGGCATCG CACCGTCGAA CATCTACCCG
ACCGCGGACG GCAGCTGGGT GGTGATCGCC GCCAACCAGG ACACCGTCTT CCGGCGCCTG
TGCGCCGCAA TGGGGCAACC GGAGCTGGCC ACCGACGAGC GCTTCGCCAA TCATGTTGCG
CGGGGCCGCA ACCAGGACGA GCTGGACAAG ATCATCGGGG CGTGGGCCGC CGAGCGTCAG
CCCGCCGACA TCATCGCCAC CCTGTCGGAG GCGGGGGTGA TCAGTGGCCC GATCAACACC
GTCGCCGAGG TCGTCAAGGA TCCGCAGTTG CAGGCGCGCG GCATGATCGC CGACCACTGG
GACGAACGCA TCGGACGAAA CGTCAAGGGT CCAGGGGTGG TCCCGGTGCT CTCCGAAACG
CCGGGCACCA TCCGCAGCGC CGGATCGTCG CGGCCAGGCG AACACAACGA CGAGATCTAC
CGCGGCCTGC TCGGCAAAAC CGATGCCGAA CTCGAGCGGC TGCGGGCGGG AGGTGTGCTG
TGA
 
Protein sequence
MTTGPLDGIR VIEVGTLISG PFAGRLLGDM GAEVIKIEPP GAPDPLRTWG QAELDGHHFF 
WTVHARNKKA VTLNLRVPEG RELFLDLVER SDVIVENFRP GTLEKWGLGY DVLRERNRGI
ILVRVSGYGQ TGPDAHKAGY ASVAEAASGL RHMNGFPGGP PPRLALSLGD SLAGMFAAQG
ALAALYRRSV TGDGQVVDAA LTESCLAVQE STIPDYDVGG VVRGPSGTRL EGIAPSNIYP
TADGSWVVIA ANQDTVFRRL CAAMGQPELA TDERFANHVA RGRNQDELDK IIGAWAAERQ
PADIIATLSE AGVISGPINT VAEVVKDPQL QARGMIADHW DERIGRNVKG PGVVPVLSET
PGTIRSAGSS RPGEHNDEIY RGLLGKTDAE LERLRAGGVL