Gene Mvan_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1883 
Symbol 
ID4645753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2010805 
End bp2011482 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content68% 
IMG OID639805371 
ProductNADH dehydrogenase subunit C 
Protein accessionYP_952710 
Protein GI120402881 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGGCG ACGACGAGCC CGATCCCGAG GTGATCGGGG TACGGCGCGG CATGTTCGGT 
GCCAAGGGCA GCGGTGACAC GTCGGGCTAC GGCCGGCTGA TCCGCTCCGT CGCGTTGCCG
GGCAGCTCAC CGCGTCCGTA CGGCGGCTAC TTCGACGACG TGGTCGACGC GCTGGAAAGC
GCGCTGGGGC ACGACGTGTT CGCCGAATCG GTCGAGCGGG TGGTGGTGTA CCGCGACGAA
CTCACCCTGG AGGTGCACCG CGACCGGCTC GTCGACGTCG CGCAAACCCT GCGCGACGAC
CCCGACCTGC GTTTCGAACT GTGCCTCGGC GTCAGCGGCG TGCACTACCC CGATGACGCC
GATCGCGAAC TGCACGCCGT CTACCCGCTG ATGTCGATCA CGCACAACCG CCGTATCCGC
ATCGAGGTGG CAGCCCCCGA CAGCGACCCG CACATTCCGT CGCTGTTCCG GGTGTACCCC
ACCACCGACT GGCACGAGCG TGAGACCTAC GACTTCTTCG GTCTGATCTT CGACGGTCAT
CCCGCCCTGA CGCGCATCGA GATGCCCGAT GACTGGGTGG GCCATCCGCA GCGCAAAGAC
TATCCGCTGG GCGGGATTCC GGTCGAGTAC CACGGCGCCG AGATCCCGCC GCCCGACGAA
CGCAGGGCAT ACAGCTGA
 
Protein sequence
MTGDDEPDPE VIGVRRGMFG AKGSGDTSGY GRLIRSVALP GSSPRPYGGY FDDVVDALES 
ALGHDVFAES VERVVVYRDE LTLEVHRDRL VDVAQTLRDD PDLRFELCLG VSGVHYPDDA
DRELHAVYPL MSITHNRRIR IEVAAPDSDP HIPSLFRVYP TTDWHERETY DFFGLIFDGH
PALTRIEMPD DWVGHPQRKD YPLGGIPVEY HGAEIPPPDE RRAYS