Gene Mvan_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1880 
Symbol 
ID4645750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2007397 
End bp2008722 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content67% 
IMG OID639805368 
ProductNADH-quinone oxidoreductase, F subunit 
Protein accessionYP_952707 
Protein GI120402878 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID[TIGR01959] NADH-quinone oxidoreductase, F subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC TGACCCCGGT GCTGAGCCGG TTCTGGGACG AGCCACAGCC GTGGTCGCTG 
GACACCTACC GCAGGCACGG CGGCTACCAG GCGTTGGACC GGGCGCTGGC CATGACCCCG
GATCAGGTGA TCACCACCGT CAAGGACTCC GGGCTGCGCG GCCGCGGCGG TGCGGGCTTT
CCCACCGGCA CGAAGTGGTC GTTCATCCCC CAAGGCGACG AGGGCCCGGC GGCCAAGCCG
CACTATCTGG TGATCAACGC CGACGAGTCG GAACCTGGTA CGTGCAAAGA CATTCCACTG
ATGCTGACCA CTCCGCACTT CCTGGTCGAG GGTGCGATCA TCGCCGCGTA CGCGATCCGC
GCCCACCATG CGTTCATCTA CCTGCGCGGC GAGGTGGTGC CGGTGCTGCG GCGGCTGCAG
GCCGCGGTCG CCGAGGCTTA CGCCGCAGGA CATCTGGGCA GCGACATCCA CGGCTCCGGC
TTCGATCTGG AACTCATCGT GCATGCAGGC GCGGGCGCCT ACATCTGCGG CGAGGAGACG
GCACTGCTGG ACTCGCTGGA GGGCAGGCGC GGACAACCCC GGCTGCGGCC GCCGTTTCCC
GCCGTCGCGG GTCTCTACGC GTGCCCCACC GTGGTCAACA ACGTCGAGTC GATCGCGAGC
GTGCCGCCGG TCCTGCTCAA CGGTGTCGAC TGGTTCCGCT CGATGGGGTC GGAGAAGTCA
CCCGGATTCA CGCTGTACTC CCTGTCCGGT CATGTCACCA CACCCGGACA GTACGAGGCG
CCGCTGGGGA TCACGCTGCG CGAGTTGCTG GAGTACGCGG GCGGGGTGCG CGCCGGTCAC
GAACTGAAGT TCTGGACACC GGGTGGATCG TCGACGCCAC TGCTGACCGC CGAACATCTG
GACGTGCCCT TGGATTACGA AGGCATGGCC GGTGTCGGGT CGATGCTCGG CACCAAGGCG
TTGCAGATCT TCGACGAGAC CACGTGTGTG GTGCGGGCGG TGCGCCGCTG GACCCAGTTT
TACGCGCACG AATCCTGCGG CAAATGCACG CCGTGCCGGG AGGGCACCTA CTGGTTGGCG
CAGATCTACG AGCGGCTGGA GACCGGCGCG GGCACCGAGG CCGACCTGGA CAAGCTGCTC
GACATCTCCG ACAACATCTT CGGCAAGTCG TTCTGCGCGC TCGGTGACGG CGCGGCCAGC
CCGATCATGT CCTCGCTCAA ACACTTTCGC GCCGAGTACG AGGCGCACCT CGACCCTGTC
GGCAAGGGGT GCCCGTTCGA CCCGTACGCA TCGATGCTGG CCGCACCGGA AGGGGTGGGC
GCATGA
 
Protein sequence
MTALTPVLSR FWDEPQPWSL DTYRRHGGYQ ALDRALAMTP DQVITTVKDS GLRGRGGAGF 
PTGTKWSFIP QGDEGPAAKP HYLVINADES EPGTCKDIPL MLTTPHFLVE GAIIAAYAIR
AHHAFIYLRG EVVPVLRRLQ AAVAEAYAAG HLGSDIHGSG FDLELIVHAG AGAYICGEET
ALLDSLEGRR GQPRLRPPFP AVAGLYACPT VVNNVESIAS VPPVLLNGVD WFRSMGSEKS
PGFTLYSLSG HVTTPGQYEA PLGITLRELL EYAGGVRAGH ELKFWTPGGS STPLLTAEHL
DVPLDYEGMA GVGSMLGTKA LQIFDETTCV VRAVRRWTQF YAHESCGKCT PCREGTYWLA
QIYERLETGA GTEADLDKLL DISDNIFGKS FCALGDGAAS PIMSSLKHFR AEYEAHLDPV
GKGCPFDPYA SMLAAPEGVG A