Gene Mvan_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1830 
Symbol 
ID4644210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1951828 
End bp1953207 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content64% 
IMG OID639805319 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_952658 
Protein GI120402829 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases
[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.772754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.208991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCA TCCAGTACTA CTTGGATTGC TTGTCGCATG CGTCGTATCT GATTGCCGAC 
GAGACCACCG GTCGTGCGGT GGTGGTCGAT CCGCAGCGTG ATGTGGCCGA GTACCTGGCT
GATGCCACCG AGTTCGGCTA CACCATCGAA CTCGTCATCG AGACGCATTT CCACGCTGAT
TTCCTGTCCG GGCATTTGGA GTTGGCCAAG GCCACCGGGG CCAAGATCGT GTACTCCTCG
GTCGCTGAGA CCGAGTTCGA GTCGATGGGC GTGGCCGACG GGCAGATCTA TTCGCTGGGG
GAGGTGACGC TGAAGTTCCT GCACACCCCC GGGCATACGC CGGAGTCGTT GAGCATCGTG
GTCTATGAGC ACGCGGGCGA TGAGGTGCCG TATGGGGTGT TGACCGGGGA TGCGTTGTTC
ATCGGTGATG TGGGCCGCCC GGATCTGTTG GCGTCGATCG GGTTCACCCG GGAGGAGTTG
GCCGACAAGC TGTATGACTC GTTGCATACC AAGTTGATGA CGCTGCCCGA TGCGACCCGG
GTGTATCCGG CTCATGGTGC GGGTTCGGCG TGCGGGAAGA ACTTGTCGAC GGATCTGTGG
TCGACGATGG GGGAGCAGAA GGCCACCAAT TATGCGCTGC GCGCCCCGGA CAAGGCCACG
TTCATGGAGT TGGTGACCGA GGGTCAGCCG CCGGCACCGA GCTACTTCGT CTACGACGCG
ATCCTCAACC GCAAGGACCG CGAACTGCTC GATGAGACGA AGATGCCCGA GGCGATGAGC
TACGAGCAGG TCCGCGACGC GGTCAAGGCC GGCGCGGTGC TCGTCGATGG GCGCAACCCC
GAGGAGTTCG CGTTGGGGCA TCTGCGCGGT GCGGTCAATA TCGGGTTGGA GGGCCGGTAT
GCCGAGTTCG CCGGGTCGGT GGTGCCCACC GATGTCGACA TCGTGTTGTT CACCGAACCG
GGCCAGGAGC TCGAAGGTAA GACCCGGCTG GCGCGGATCG GGTTCGACCG GGTGATCGGT
TATCTGGAGC GCCCGTTCGA GGCGATGCTC GATCACCAGG ATGAGGTGCA GGTGGCGTCG
CGGTTGACGG CCAAGGCCTT CGATGCGCGT GCCGCGGAGT TGGCGGATCT GCAGATCGTG
GATGTGCGTA ATCCGGGGGA GGTGGCTGCC GGGATGATCC CGGACGCGGT CTCGATCCCG
GTGGGGCAGC TGCCGGCCCG GTTGGGTGAG CTGGACCCAG CGAAGCCGAC GGTCGTGTAC
TGCGCCGGCG GGTACCGGTC CTCGGTGGCC GCGAGCCTGT TGCGGGCCCA CGGTTTCGCT
GATGTCAGCG ACATCCTGGG CGGCTACGGC GCCTGGGACG AAGCCCACCA AAACGCCTGA
 
Protein sequence
MKFIQYYLDC LSHASYLIAD ETTGRAVVVD PQRDVAEYLA DATEFGYTIE LVIETHFHAD 
FLSGHLELAK ATGAKIVYSS VAETEFESMG VADGQIYSLG EVTLKFLHTP GHTPESLSIV
VYEHAGDEVP YGVLTGDALF IGDVGRPDLL ASIGFTREEL ADKLYDSLHT KLMTLPDATR
VYPAHGAGSA CGKNLSTDLW STMGEQKATN YALRAPDKAT FMELVTEGQP PAPSYFVYDA
ILNRKDRELL DETKMPEAMS YEQVRDAVKA GAVLVDGRNP EEFALGHLRG AVNIGLEGRY
AEFAGSVVPT DVDIVLFTEP GQELEGKTRL ARIGFDRVIG YLERPFEAML DHQDEVQVAS
RLTAKAFDAR AAELADLQIV DVRNPGEVAA GMIPDAVSIP VGQLPARLGE LDPAKPTVVY
CAGGYRSSVA ASLLRAHGFA DVSDILGGYG AWDEAHQNA