Gene Mvan_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1772 
Symbol 
ID4647068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1884751 
End bp1885509 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content68% 
IMG OID639805260 
Producthypothetical protein 
Protein accessionYP_952600 
Protein GI120402771 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.290966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.767063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCA TGTGCGGGCG ATTCGCGGTG ACGACCGATC CGGCGCTGCT GGCCGAGAAG 
ATCAAGGCGA TCGACGAAAC GGCGGCCGCC AAAACCGACG GGCCGAACTA CAACGTGGCG
CCCACGACCA GCGTCGCGAC CGTCGTCAAA CGCCACACCG AACCCGACGA CGAGTCCACC
CGCCGGATCC GGCTGATGCG CTGGGGGCTG GTGCCGCCCT GGGCCAAGGC CGGCGACGAC
GGCAGCCCCG ACACCAAGAG CGGTCCGCTG CTGATCAACG CCCGCTCCGA CAAGGTCACG
TCCTCTCCGG CGTTCCGCAG CTCCGCGAAG GCCAAGCGCT GCCTGGTGCC GATGGACGGC
TGGTACGAGT GGAAGGGCCA GAAGGGCGCC AAGACGCCGT ACTACATGCA CACCCGCGAC
GGGGAGCCGC TGTTCATGGC CGGGTTGTGG TCGACGTGGC GGCCCAAAGG CGCCGACAAG
GACGTCAAAC CGCTGCTGAG CTGCACGATC ATCACCACCG ACGCCGTCGG CCCCCTTGCC
GACATCCACG ACCGGATGCC GTTGACCATC AGTGCACCGG ACTGGGACCG CTGGCTCGAC
CCGGACGCAC CGGTCGACGA AGGGCTGCTG CGCGGCCACG GTGACCTCGA CCGCATCGAG
GTCCGGGAGG TGTCGCGGTT GGTCAACAGC GTGCGCAACA ACGGACCGGA ACTCATCGAG
CCGGTCACGC CGCAGGCCGA GCAAGGCACC CTGCTTTGA
 
Protein sequence
MDTMCGRFAV TTDPALLAEK IKAIDETAAA KTDGPNYNVA PTTSVATVVK RHTEPDDEST 
RRIRLMRWGL VPPWAKAGDD GSPDTKSGPL LINARSDKVT SSPAFRSSAK AKRCLVPMDG
WYEWKGQKGA KTPYYMHTRD GEPLFMAGLW STWRPKGADK DVKPLLSCTI ITTDAVGPLA
DIHDRMPLTI SAPDWDRWLD PDAPVDEGLL RGHGDLDRIE VREVSRLVNS VRNNGPELIE
PVTPQAEQGT LL