Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1765 |
Symbol | |
ID | 4647061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 1876439 |
End bp | 1878160 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639805253 |
Product | choline/carnitine/betaine transporter |
Protein accession | YP_952593 |
Protein GI | 120402764 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.582743 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACA TCTCCGCGCA CGAGCCGACC GTGATTCCCG CAGTCGACAC CGACGATCCA ACCATTGAAC CCACCCCGCA CCCAGTGCTC GACATTGCCG TCGAGGAGGA GAGGATCGCC CGAGCCCGCG GCGTCGACTG GGTGGTGTTC GGTGCCACGG CGGCCATCGC GATCGCCTTC CTAGTGTGGG GTTTCCGCAG CACCGACACT CTCGCCAGCA CCTCCAGCGC CGCGCTGGCC TGGGTGATGG ACAACACCGG ATGGCTTTTC GTGCTCACCA GCACCGGCTT CGTGGTGTTC GTGCTGTATC TGGCGCTCGG CCGGTACGGC ACCATCCCGC TGGGCCGCGA CGACGAAAGC CCTGAGTTCA ACGGGATTTC CTGGGTGGCG ATGATGTTCA GCGCCGGCAT GGGCATCGGC CTGATGTTCT TCGGGGTGGC CGAACCGCTG TCGCATTTCA CCACCCCGCC GCCGGGCACC GGCGCCGAAG GCAACCCCGA CGCCGTGCAG AATGCGATGG CCACCACCCT GTTCCACTGG ACCCTGCACC CGTGGGCGAT CTACGCCGTC GTCGGCCTGG CCATCGCCTA CGGCGTCTAC CGCAAGGGTC GGTTACAGCT GATCAGTTCC GCGTTCGAGC CGCTGATTGG GTCCAGAGTA AACGGACCGT GGGGCAAGGT CATCGACATG CTGGCGATCT TCGCCACACT TTTCGGCTCG GCAGCCTCAC TTGGCCTGGG CGCGTTGCAG ATCCGCAGCG GTCTGCAGAT CGTCGGCGGC GTCGGCGAAA CGGGCAACGC GATCCTTGTC GTCATCATCA CCGTGTTGAC GGTGTGTTTC GTGTTGTCCG CGGTGTCCGG GGTGGCCCGC GGGATCCAGT GGTTGTCCAA CATCAACATG GTGCTCGCAG TGATGCTGGC GTTGTTCGTG TTCGTCGTCG GCCCAACGGT TTTCATACTC AACCTGCTGC CGACCACGAT GGGCAGCTAC TTCGCCGACC TCAGCATGAT GTCGGCGCGC ACCGGCGCCG AGGGCGCCGA CGTCAACGTC TGGCTGCAGT CCTGGACGAT CTTCTACTGG GCGTGGTGGG TGTCGTGGAC GCCGTTCGTC GGGATGTTCA TCGCGCGGAT CTCACGCGGC CGCACCATCC GTCAGTTCGT CGCCGGTGTG CTGCTGGTTC CGAGCCTGGT GTCGCTGATC TGGTTCGCGG TGTTCGGCGG CTCGGCGATA AACCTGCAGC AGAACGGCAC CGACCTGGCG GGCGAGGGTG GTGTGGAGGA GCAGTTGTTC ACCCTGCTCG ACCGATATCC GATTGCGACG GTCACCAGCG TGATCGTCAT CGTCCTGGTC GCAATCTTCT TCGTTTCCGG TGCCGACGCC GCATCGGTCG TGATGGGTTC GCTGTCGCAG CAGGGCACCA TCAAACCCAG CCGCGGCATC GTCGTCTTTT GGGGGACGGC CACCGGCGCG GTTGCCGCGG TCATGCTGCT CGTCGGCGGC GCGGACGCCC TGACCGGACT GCAGACCATT ACGATCGTCG CGGCGCTGCC GTTCGTGCTG GTGATGGTCG GACTGGCGGT GGCACTGGTG AAAGATCTGC GTCGCGACCC GAAGGTGGTG CGTCGGCAAT ACGCCGCCGA GGCCGTCAAC AGCGCGGTGA TCGCCGGGGT CACCCGGCAC GGTGATGATT TCGTCATCGC CGTCGAGAAG CACTCGAGGT GA
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Protein sequence | MADISAHEPT VIPAVDTDDP TIEPTPHPVL DIAVEEERIA RARGVDWVVF GATAAIAIAF LVWGFRSTDT LASTSSAALA WVMDNTGWLF VLTSTGFVVF VLYLALGRYG TIPLGRDDES PEFNGISWVA MMFSAGMGIG LMFFGVAEPL SHFTTPPPGT GAEGNPDAVQ NAMATTLFHW TLHPWAIYAV VGLAIAYGVY RKGRLQLISS AFEPLIGSRV NGPWGKVIDM LAIFATLFGS AASLGLGALQ IRSGLQIVGG VGETGNAILV VIITVLTVCF VLSAVSGVAR GIQWLSNINM VLAVMLALFV FVVGPTVFIL NLLPTTMGSY FADLSMMSAR TGAEGADVNV WLQSWTIFYW AWWVSWTPFV GMFIARISRG RTIRQFVAGV LLVPSLVSLI WFAVFGGSAI NLQQNGTDLA GEGGVEEQLF TLLDRYPIAT VTSVIVIVLV AIFFVSGADA ASVVMGSLSQ QGTIKPSRGI VVFWGTATGA VAAVMLLVGG ADALTGLQTI TIVAALPFVL VMVGLAVALV KDLRRDPKVV RRQYAAEAVN SAVIAGVTRH GDDFVIAVEK HSR
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