Gene Mvan_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1727 
Symbol 
ID4647249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1835132 
End bp1835986 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content74% 
IMG OID639805216 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_952556 
Protein GI120402727 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.681532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCC GAATCGTGAT CTCAGGAGCG GGCGGCCTGG TGGGACGCGT GTTGGCAGGT 
CAGGCCCGCC GTGCCGGCCG TGACGTGGTG GCGCTCACAT CGGCGCAGTG GGACATCACG
GATCGGGCGC AGGCCGAGCG TGTCATCGCC GCCGGCGACG TGGTCGTCAA CTGCGCCGCG
TTCACCAAGG TCGACGCCGC CGAAGCCGAA CCCGACCGCG CGCACGCGGT CAACGCCGTC
GGCGCCGGGA ACGTCGCGCA GGCCTGCGCC CGCGCCGGGG CGTCGCTGAT CCACCTGTCC
ACCGACTACG TGTTCAGCGG CTCCCGCCGC CGGCCGTATG AGATCGACGA CGAGACCGGC
CCGCTTTCGG TGTACGGGCG CACCAAACTG GCCGGTGAGC AGGCGGTCCT GGCCGCGCTG
CCCGACGCGT ACGTGGTGCG CACCGCGTGG ATCTACGAGG GCGGCGCCGG CACCGACTTC
GCCGCGGTGA TGCGACGGGC GGCCCAGGGT GACGGCACGG TCGAGGTGGT CGCCGACCAG
ATCGGCTCGC CCACCTACGT CGGCGACCTG TGCCGGGCGC TGCTGCAGAT CGCCGACGGC
GGCGTCAGGG GCCCGGTGCT GCACGCCGCC AACCTCGGCG CGGTCAGCCG ATTCGACCAG
GCGCAGGCCG TGTTCGCCGA GCTCGGCGCG GACCCGTCGC GGGTGCGGCC GGTCGGCAGC
GATCGGCATC CGCGTCCGGC GCCGCGCCCG GCCTACTCGG CGTTGTCGCC GGTGAAGTCC
GCCGAGGCGG GGTTGACCCC GCTGCGGCCC TGGCGCGACG CGTTGGCTGA GGCGCTCGCC
ACAGTGGCCG GGTAG
 
Protein sequence
MTGRIVISGA GGLVGRVLAG QARRAGRDVV ALTSAQWDIT DRAQAERVIA AGDVVVNCAA 
FTKVDAAEAE PDRAHAVNAV GAGNVAQACA RAGASLIHLS TDYVFSGSRR RPYEIDDETG
PLSVYGRTKL AGEQAVLAAL PDAYVVRTAW IYEGGAGTDF AAVMRRAAQG DGTVEVVADQ
IGSPTYVGDL CRALLQIADG GVRGPVLHAA NLGAVSRFDQ AQAVFAELGA DPSRVRPVGS
DRHPRPAPRP AYSALSPVKS AEAGLTPLRP WRDALAEALA TVAG