Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1646 |
Symbol | |
ID | 4648688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 1748852 |
End bp | 1749511 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639805141 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_952481 |
Protein GI | 120402652 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.92254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCCTC CTCCGGTGGC ACGGATCCTG CTGGCCGACG ATCACGCGCT GGTCCGCAGC GGTCTGCGGA TGATTCTCGA CGCCGAGCCC GACCTGCGTG TGGTGGTTGA GGCCGCCGAC GGTTACCAGG CGCTCAACGC CCTGGAGCAG ACACCGGTCG ATATCGCGAT CCTCGACATC GCGATGCCGC GGATGACCGG CCTGCAAGCC GCGCGGGAGA TCAGCCGCAA GTATCCGCAC GTGCGGATCC TGATCCTGTC GATGCACGAC AACGAGCAGT ACTTCTTCGA AGCGCTCAGG GCGGGCGCGT CGGGTTACGT GCTGAAGTCC GTGGCGGACC TCGACCTGCT CAAGGCTTGT CGCGCCACCC TGCGTGGCGA GCCTTTCGTC TATCCCGGCG CGGTCACCGC GCTGATCCAG GACTACCTGA ACCGGGCCCG GCACGGCGAC GACCTTCCCG GCACCATCGT CACCTCCCGC GAGGAGGAGG TCCTCAAGCT GATCGCCGAG GGCTACTCGA CCCGCGAGAT CGCCGGCACA CTGGGCATCA GCGCCAAGAC CGTGGACCGG CACCGGGCCA ACCTGCTGGC CAAGCTCGGT CTGCGGGACC GGCTCGCGCT GACCCGGTAC GCGATCCGCG TCGGGCTCAT CGAACCCTGA
|
Protein sequence | MTPPPVARIL LADDHALVRS GLRMILDAEP DLRVVVEAAD GYQALNALEQ TPVDIAILDI AMPRMTGLQA AREISRKYPH VRILILSMHD NEQYFFEALR AGASGYVLKS VADLDLLKAC RATLRGEPFV YPGAVTALIQ DYLNRARHGD DLPGTIVTSR EEEVLKLIAE GYSTREIAGT LGISAKTVDR HRANLLAKLG LRDRLALTRY AIRVGLIEP
|
| |