Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1587 |
Symbol | sdhA |
ID | 4648628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 1680436 |
End bp | 1682190 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639805082 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_952422 |
Protein GI | 120402593 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.243588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.596865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTTG AACACCGCTA CGACGTCGTG ATCGTCGGCG CAGGTGGCGC CGGAATGCGC GCGGCCGTGG AGGCAGGACC GCGGGCACGG ACCGCGGTGC TGACCAAGCT CTACCCGACG CGCTCGCACA CCGGCGCCGC ACAGGGCGGC ATGTGCGCCG CGCTGGCCAA CGTCGAGGAA GACAACTGGG AGTGGCACAC CTTCGACACC GTCAAGGGCG GTGACTACCT GGCCGACCAG GACGCCGTCG AGATCATGGC CAAGGAGGCC ATCGACGCGG TGCTCGACCT GGAGAAGATG GGGATGCCGT TCAACCGCAC CCCCGAGGGC CGTATCGACC AGCGCCGCTT CGGCGGGCAC ACCCGCGACC ACGGCAAGGC CCCGGTGCGC CGGGCCTGCT ACGCCGCCGA CCGCACCGGA CACATGATCC TGCAGACGCT GTACCAAAAC TGCGTCAAGC ACGACGTCGA GTTCTTCAAC GAGTTCTACG CCCTCGACAT CACGCTGACC GAGACGGCGT CGGGTCCGGT GGCCACCGGC GTCGTCGCGT ACGAGTTGGC GACGGGCGAC ATCCACATCT TCCACGCCAA GGCGATCGTG TTCGCCACCG GCGGGTCGGG CCGGATGTAC AAGACCACGT CGAATGCGCA CACGCTGACC GGCGACGGGC TGGGCATCAT CTTCCGCAAG GGACTTCCCT TGGAGGACAT GGAGTTCCAC CAGTTCCACC CGACGGGCCT GGCCGGCCTG GGCATCCTGA TCTCCGAGGC CGTGCGCGGC GAGGGCGGCC GGTTGCTCAA CGGCGAGGGC GAGCGCTTCA TGGAACGCTA CGCACCGACC ATCGTCGACC TGGCGCCGCG CGACATCGTC GCCCGCTCAA TGGTTCTCGA GGTGCTCGAA GGTCGCGGCG CCGGCCCGAA CAAGGACTAC GTCTACATCG ACGTGCGCCA CCTCGGCGAG GACGTGCTGG AAGCCAAGCT GCCCGACATC ACCGAGTTCG CCCGCACCTA CCTGGGCGTG GACCCGGTCA AGGAACTCGT GCCCGTCTAC CCGACGTGCC ACTACGTGAT GGGCGGCATC CCGACCACCG TCAACGGCCA GGTGCTCGCG GACAACACCA CGATCATCCC CGGCCTGTAC GCCGCCGGAG AGTGCGCATG CGTGTCGGTG CACGGCGCCA ACCGGCTGGG CACCAACTCG CTGCTGGACA TCAACGTGTT CGGCCGCCGC GCGGGCATCG CCGCCGCGAA TTACGCACTG GGACATGACT TCGTGGACCT GCCGGAGAAC CCCGCCGAGA TGGTGGTCGG CTGGGTCGGC GACATCCTCT CCGAGCACGG CAACGAGCGC GTCGCCGACA TCCGCGGAGC GCTGCAGCAG TCGATGGACA ACAACGCCGC GGTGTTCCGC ACCGAGGAGA CGCTCAAGCA GGCGCTCACC GACATCCATG CGCTCAAGGA GCGGTACTCG CGAATCACGG TGCAGGACAA GGGCAAGCGC TACAACAGCG ACCTGCTGGA AGCCATCGAG CTGGGCTTCC TGCTGGAGCT CGCCGAGGTC ACCGTGGTGG GCGCGTTGAA CCGCAAGGAA TCCCGCGGCG GGCATGCCCG TGAGGACTAC CCCAACCGCG ACGACACCAA CTACATGCGT CACACCATGG CGTACAAGGA GGGCACCGAC CTGCTCTCCG ACATCCGGTT GGACTACAAG CCCGTCGTCC AGACGCGGTA CGAGCCGATG GAACGGAAGT ACTGA
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Protein sequence | MIVEHRYDVV IVGAGGAGMR AAVEAGPRAR TAVLTKLYPT RSHTGAAQGG MCAALANVEE DNWEWHTFDT VKGGDYLADQ DAVEIMAKEA IDAVLDLEKM GMPFNRTPEG RIDQRRFGGH TRDHGKAPVR RACYAADRTG HMILQTLYQN CVKHDVEFFN EFYALDITLT ETASGPVATG VVAYELATGD IHIFHAKAIV FATGGSGRMY KTTSNAHTLT GDGLGIIFRK GLPLEDMEFH QFHPTGLAGL GILISEAVRG EGGRLLNGEG ERFMERYAPT IVDLAPRDIV ARSMVLEVLE GRGAGPNKDY VYIDVRHLGE DVLEAKLPDI TEFARTYLGV DPVKELVPVY PTCHYVMGGI PTTVNGQVLA DNTTIIPGLY AAGECACVSV HGANRLGTNS LLDINVFGRR AGIAAANYAL GHDFVDLPEN PAEMVVGWVG DILSEHGNER VADIRGALQQ SMDNNAAVFR TEETLKQALT DIHALKERYS RITVQDKGKR YNSDLLEAIE LGFLLELAEV TVVGALNRKE SRGGHAREDY PNRDDTNYMR HTMAYKEGTD LLSDIRLDYK PVVQTRYEPM ERKY
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