| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1508 |
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| Symbol | |
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| ID | 4648366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 1594739 |
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| End bp | 1595317 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639805006 |
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| Product | RNA polymerase sigma factor SigD |
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| Protein accession | YP_952346 |
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| Protein GI | 120402517 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.642503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATTT CGGGAGAACG TCTCGATGCT GTCGTTGCTG AAGCTGTCGC CGGTGATCGG
GACGCACTCC GGGAGGTGCT GGAGACCATC CGCCCCCTCG TTGTCCGGTA TTGCCGGGCG
CGGGTGGGGA CCGCGGAACG CAGTGGTCTT TCAGCTGATG ACGTAGCTCA GGAGGTGTGC
TTGGCCGCCA TCACGGCGCT GCCGCGTTAC AAGGATCAGG GACGACCGTT CCTGGCCTTC
GTGTACGGGA TCGCAGCGCA CAAGGTTGCT GACGCGCATC GTGCCGCCGG GCGAAACAAA
GCGGATCCGA TGGATGTCGT CCCCGAGCGC TTTTCCGGCG AGGCCGGTCC GGAGCAGCTC
GCGATCGACT CCGAATCATC GGCGCGGATG GCCGAGCTGC TGCAGATCCT TCCCGAGAAG
CAGCGCGAGA TCCTGATCCT GCGTGTCGTG GTCGGTATGA GCGCGGAGGA AACCGCGGAC
GCCGTCGGAA GCACGGCGGG GGCGGTGCGG GTGGCCCAGC ACCGCGCGCT GACCCGATTG
AAGACCGAGA TCATGGCGGC GGGGCGTGAT CATGCCTGA
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| Protein sequence | MTISGERLDA VVAEAVAGDR DALREVLETI RPLVVRYCRA RVGTAERSGL SADDVAQEVC
LAAITALPRY KDQGRPFLAF VYGIAAHKVA DAHRAAGRNK ADPMDVVPER FSGEAGPEQL
AIDSESSARM AELLQILPEK QREILILRVV VGMSAEETAD AVGSTAGAVR VAQHRALTRL
KTEIMAAGRD HA
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