Gene Mvan_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1493 
Symbol 
ID4645386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1582464 
End bp1583195 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content67% 
IMG OID639804991 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_952331 
Protein GI120402502 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.666378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAC GCGGCGCCAC TGCCTTGGTC ACGGGAGCGA ACCGGGGGAT CGGCCATCAC 
TTCGCCGTCG AATTGCTGCA ACGAGGAGCC AAGGTCTACG CCACAGCCCG TCGTCCCGAG
TTGGTCAGCG TTCCCGGCGC GGAGGTGATC CGTCTCGACA TCACCGACCA GTCCTCGGTC
GACGCAGTCG CCGCAGTAGC CGGCGACGTC GACGTGCTGA TCAACAATGC CGCCGACACT
GCGGGCGGAA ACCTTGTGAC CGGCGACCTG GACGCGATCC GGTCGACAAT GGACTCGAAC
TACTACGGCA CCCTCGCAAT GATCCGAGCG TTCGCACCCA TCCTCGGACG AAACGGGGGC
GGAGCCATCC TCAACGTTCT GTCCGCGGCG GCGTGGACCA CGGTCGACGG GAACACCGCC
TACGCGGCCG CGAAGTCGGC CCAGTGGGGC CTGACCAACG GCGTGCGAAT CGAACTGGCC
CCCCAGGGGA CTCAGGTGGT CGCGCTGGTG CCCGGTCTGG TGGGCACGCA GACCCTCTTC
GACTTCGCGG AACGCCACGG CATCGAATTT CCCGACGGCG CCGTGATGGA CCCGGCCGAT
CTCGTCCGGT TGGCACTCGA CGGTCTCGAA CGCGGCGAGA TCGAGATCCT CGACCCGATG
GGAGTCGACG CGAAAACCAG TCTCGCCGGA CCGCCCCGCG CCTTTGCGCC GAGCGCATTC
GACGCGGGTT GA
 
Protein sequence
MKLRGATALV TGANRGIGHH FAVELLQRGA KVYATARRPE LVSVPGAEVI RLDITDQSSV 
DAVAAVAGDV DVLINNAADT AGGNLVTGDL DAIRSTMDSN YYGTLAMIRA FAPILGRNGG
GAILNVLSAA AWTTVDGNTA YAAAKSAQWG LTNGVRIELA PQGTQVVALV PGLVGTQTLF
DFAERHGIEF PDGAVMDPAD LVRLALDGLE RGEIEILDPM GVDAKTSLAG PPRAFAPSAF
DAG