Gene Mvan_1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1427 
Symbol 
ID4647098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1519263 
End bp1519901 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID639804927 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_952267 
Protein GI120402438 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGCG TGTTTCTGGT CGATGATCAC GAAGTGGTCA GGCGGGGCCT TATCGATCTG 
CTCAGCACTG ATCCGGAGTT GGACGTGGTC GGTGAGGCGG GTTCGGTGTC CGAGGCGCTG
ACCCGGATCC CCGCCGTCGC GCCGGAAGTC GCGGTGCTCG ATGTCCGGTT ACCGGACGGC
AACGGCATCG AATTGTGCCG GGATCTGCTG TCCCGGGTGC CGGGGCTGCG GTGCCTGATG
CTGACGTCGT TCACGTCGGA CGAGGCCATG CTCGATGCGA TCCTGGCCGG CGCGAGTGGC
TACGTCATCA AAGACATCAA GGGTATGGAG CTCGCCGAAG CGATCAAAGA CGTGGGTGCG
GGGCGGTCTC TGCTGGACAA TCGCGCCGCG GCGGCGCTGA TGTCGAGGTT GCGCGACACC
GCCGAGCGCG CAGACCCGCT GCTGGGTCTG AGCAGCCAGG AGCGGGTGCT GCTTGACCTG
CTCGGCGAAG GGCTGACCAA CAAGCAGATC GCGGACCGGA TGTTCCTGGC CGAGAAGACC
GTGAAAAACT ACGTCTCCCG GCTGTTGGCC AAACTCGGTA TGGAGCGCCG CACCCAGGCG
GCCGTGTTCG TGTCCAGGCT GGATCGGGCC GGCCGTTAG
 
Protein sequence
MVRVFLVDDH EVVRRGLIDL LSTDPELDVV GEAGSVSEAL TRIPAVAPEV AVLDVRLPDG 
NGIELCRDLL SRVPGLRCLM LTSFTSDEAM LDAILAGASG YVIKDIKGME LAEAIKDVGA
GRSLLDNRAA AALMSRLRDT AERADPLLGL SSQERVLLDL LGEGLTNKQI ADRMFLAEKT
VKNYVSRLLA KLGMERRTQA AVFVSRLDRA GR