Gene Mvan_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1425 
Symbol 
ID4646445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1517023 
End bp1517916 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content71% 
IMG OID639804925 
ProductUspA domain-containing protein 
Protein accessionYP_952265 
Protein GI120402436 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGG CCGCGGAGTT CGGAAATGAG ATCGGGAATG TAGTTGTCGG CGTCGACGAT 
TCGCCCTCGT CACAGCCGGC GCTGGAGTGG GCCGCCGCGG AGGCGAAGCT GCGGAACATA
CCGCTCGTCA TCCTGTATGC GACCACGCTG CCCATCGGGG CGTGGCCGGT CGTTCCGGTC
CCGACCGGCT TCCTGGACTG GCAGCGGCAG ATCGGCCAGG ACATCCTGAA GGACGCCGGT
CAGATCGCCA AGGAACTCAC CGGGGGCGCC GTTCCGGTGA CCGCCGAGTT CGCCGTCGCG
ACCCCGACCG CCGCACTGGT GGAGGCGTCG CACACGGCGG GAATGGTGGT CGTCGGTTCC
CGGGGGCAGG GTGGCCTGCT GCGCAAGGTG CTCGGAAGCA CCAGCATGGG GGTGATCCAC
CGCGCACACT GCCCGGTCGT CGTGGTGCAC GACGAGGAGC CGGCGCCGCC CGGAGGGGCG
CCGGTGGTGC TGGGGTTCGA CGGCTCCCCC GGGTCCGAAG CCGCTGTCGA GATCGCGTTT
CAGGAGGCCT CGCGCCGGGG TGTGGGGCTT GTCGCGCTGC ACTCGTGGTG GTCGCCGGGC
GCCTTCGAGA TGCCGGGCTT CGACTGGGAG GAGATTCGCC CCGAGGTGGA ACAGGAAGCC
GCTCGACAGC TCGCGCCCTG GCAGAAGCGT TATCCCGGGG TGGCAGTCGA ACGTGTCGTG
GTGTCCGACG AGCCGGCCCG CCGGCTCGTC GAGCGGTCCG AGTCGGCTCA GTTGCTCATC
GTGGGCAGTC ACGGGTACGG CGCGGTGACG GGCGCGCTGC TCGGGTCGGT CAGCGGCGCC
GTGGTGCAGG CGGCACGGGT GCCCGTCATG GTGGTCCGCC CGCGAACCCC GTGA
 
Protein sequence
MAAAAEFGNE IGNVVVGVDD SPSSQPALEW AAAEAKLRNI PLVILYATTL PIGAWPVVPV 
PTGFLDWQRQ IGQDILKDAG QIAKELTGGA VPVTAEFAVA TPTAALVEAS HTAGMVVVGS
RGQGGLLRKV LGSTSMGVIH RAHCPVVVVH DEEPAPPGGA PVVLGFDGSP GSEAAVEIAF
QEASRRGVGL VALHSWWSPG AFEMPGFDWE EIRPEVEQEA ARQLAPWQKR YPGVAVERVV
VSDEPARRLV ERSESAQLLI VGSHGYGAVT GALLGSVSGA VVQAARVPVM VVRPRTP