Gene Mvan_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1395 
Symbol 
ID4644611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1486501 
End bp1488180 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content69% 
IMG OID639804895 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_952235 
Protein GI120402406 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.735957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.354354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCAC TGCGGGACAC GTTGTCTCAG CTTAGGCTTC GCGAACTTCT CAACGAAGTG 
CAGGATCGGG TCGAACAGAT CGTCGAAGGC CGTGACCGGC TGGACGGGCT GCTCGACGCG
ATGCTCGTCG TCACGTCGGG CCTGGAACTC GACGAGACGC TGCGCACGAT CGTGCGGACC
GCCATCGACC TGGTCGACGC TCAGTACGGG GCGCTCGGTG TGCGCGGGCA CGACCACGAA
CTGGTCGAAT TCATCTACCA GGGGATCGAC GAGCAGTCCA AGGAGCTGAT CGGGCACCTG
CCCGAGGGAC GGGGCGTCCT GGGGGTTCTG ATCGACGATC CGAAGCCGAT CCGGTTGGAC
AGGATTTCCC AGCACCCGGC CTCGGTGGGC TTTCCGCCCA ACCATCCGCC CATGCGGACC
TTCCTCGGGG TGCCGGTGCG GATCCGCGAC GAGGTGTTCG GCAACCTCTA TCTGACCGAG
AAGGCGGACG GGCAACCGTT CAGCGAGGAC GACGAGGTGC TGGTCCAGGC GCTGGCCGCG
GCGGCCGGCA TCGCCATCGA GAACGCCCGG CTCTACCAGC AGTCCAAGAC CAGGCGATCC
TGGATCGAGG CCACCCGCGA CATCGGCACG GAGATGCTCT CGGGTGCCGA TCCGTCCAAG
GTGTTCCGGT TGGTGGCCGA CCAGTCGCGC CTCCTCAGCG GTGCACAGTC GACACTGGTC
GCGGTGCGCT CCGATCTCGA CGAGCTCGAC GGGCGGGTCG ATGAACTGGT GGTGGTCGCC
ACCGCCGGTG ACGGCCCGGG GGTTTCCCTG AGCGCCATCC CCACCCACGG CAGCGCGATC
GGTGAGGTCT TCTCCACCAA GACGCCGGTA CGCTTCGACA CCCTCGAGCT GGAGCCCCGG
CACCTGGCAC CGGGGCCTGC GCTGGTGCTG CCGCTGCGCG CGACCGACAC GGTGGCCGGG
GTGTTGGTGG CGCTGCGGCC GGAGGGGGCG CCGCCCTTCA ACGCCGAGGA ACTCGACATG
ATGGCGGCCT TCGTCGACCA GGCGGCGCTG GCCTGGCAGC TGGCCACCAC GCAGCGACAG
TTGCGCGAGC TCGACGTGCT CACCGATCGC GACCGCATCG CCCGCGACCT GCACGATCAT
GTGATCCAGC GGCTGTTCGC GGTGGGCCTG GCCCTGCAGG GCACGATTCC GCGGGCCCGC
GCGCCGGAGG TCCGGGAGCG GCTCACCGAC TGCGTCGACG ACCTGCAGCA GGTGATCCAG
GAGATCCGGA CCGCGATCTT CGACCTGCAC GGTGGGCACG GGGGCAGCAA CCGGCTGCGG
CAGCGGCTCG ACGAGGCCAT CGCCCAGTTC ACCGCCTCCG ACGTGCACAC CACCGTCCAG
TTCTCCGGTC CGCTGTCGGT CGTCGACCCG GCGCTGTCCG ACCACGCCGA AGCCGTGGTC
CGCGAAGCGG TCAGCAACGC GATCCGGCAC TCCGGTGCGA CCACGCTGGA CGTCAGTGTC
ACCGCCGCCG ACGAGCTGAT CATCGAGGTG GCCGACGACG GCTGCGGTAT GCCCGCCGAC
GTCACCGAGA GCGGGTTGAC CAACCTGCGT CAGCGGGCCG GCGACGTCGG TGGCACGTTC
ACCGTCGAGT CGGGTGACGC CGGGGGCACC AGGCTGCGGT GGTGCGCCCC GTTGCGCTGA
 
Protein sequence
MRPLRDTLSQ LRLRELLNEV QDRVEQIVEG RDRLDGLLDA MLVVTSGLEL DETLRTIVRT 
AIDLVDAQYG ALGVRGHDHE LVEFIYQGID EQSKELIGHL PEGRGVLGVL IDDPKPIRLD
RISQHPASVG FPPNHPPMRT FLGVPVRIRD EVFGNLYLTE KADGQPFSED DEVLVQALAA
AAGIAIENAR LYQQSKTRRS WIEATRDIGT EMLSGADPSK VFRLVADQSR LLSGAQSTLV
AVRSDLDELD GRVDELVVVA TAGDGPGVSL SAIPTHGSAI GEVFSTKTPV RFDTLELEPR
HLAPGPALVL PLRATDTVAG VLVALRPEGA PPFNAEELDM MAAFVDQAAL AWQLATTQRQ
LRELDVLTDR DRIARDLHDH VIQRLFAVGL ALQGTIPRAR APEVRERLTD CVDDLQQVIQ
EIRTAIFDLH GGHGGSNRLR QRLDEAIAQF TASDVHTTVQ FSGPLSVVDP ALSDHAEAVV
REAVSNAIRH SGATTLDVSV TAADELIIEV ADDGCGMPAD VTESGLTNLR QRAGDVGGTF
TVESGDAGGT RLRWCAPLR