| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1343 |
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| Symbol | |
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| ID | 4643699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 1427607 |
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| End bp | 1429391 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639804843 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_952183 |
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| Protein GI | 120402354 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.19865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCTG CGCTGTCCGG GGTGCCCGGG TTCGACGACG TCCGTGAGTT CGCCCGTAAG
GTCGACACCG CCCGCCATCA GGGGGTGCCC GACGGGTGCA TTCTCGAACT CGATCTGCAG
AGCGCGCCGC CGGAGTCCGC CGGATTCGAC CCGATCGCTG TGATCTCGGG GGTGATCGGG
CCCGGGAGGC CCCTGTTGCT GCGCGAGGCG GTCGCGGCGA TCCACCGCGC CGCCGAGGAT
CCCCGGGTGG CCGGGCTGAT CGCCCGCGTC CAGATCGACG CCGCGCCACC GGGACCAGTC
CAGGAGTTGC GCGACGCCAT CGTCGCGTTC ACCGGGAAGA AGCCGTCGCT GGCCTGGGCC
GAGACCTACC CCGGCACGTT GTCCTACTAT CTGGCCTCGG CGTTCGGCGA GGTGTGGATG
CAGCCGTCGG GCACGGTCGG GCTGGTCGGC TTCGCCACCA GCGCGCTGTT CCTGCGCGAT
GCCCTCGACA AGCTGGGGGT GCAGGCGCAA TTCGTCACCC GCGGCGAATA CAAGTCGGCG
GCAAACCTTT TCACCCAGGA CAGCTACACC GACGCGCACC GCGAAGCCGA CACCGCTCTG
GTCAACGGTC TGCGCACGCA GGTGTGGGAC GCGGTGGCCG CCTCCCGCGG CATCGACCGC
GCCGCGCTGG ACGCGCTGGC CGACCGGGCC CCGCTGCTGC GTGACGACGC GGTGACCGCG
GGGCTGGTGG ACCGCATCGG CTTCCGCGAC GAGGCTTACG CGCGCATCGC GGAAATGTCG
GGCGCCGAGG GGGTTTCACC GGAGACGGGT GACCCCGACG GTGAGGACGC ACCGCCGCGG
CTGTTCCTCG CGCGTTATGC CAGGACCAAG AGGCCTTCGG TGCCGGGGCT CAGGCGCCAT
CCGAAGATCG CGGTGGTGAC GGTGGCGGGG CCGATCGTCA GCGGCCGGGG TGGGCGGCAG
ATGTCGCCGA TGGGCGGCTC CAGCTCCGGC GCGGACACCA TCGCCGCCGC GCTGCGCAGG
GCCGCCGCCG ACGACGACAT CGCGGCGATC GTGCTGCGGG TCGACAGCCC GGGCGGTTCG
GTCACCGGCT CGGAGACGAT CTGGCGCGAG GTGGTGCGGA CCCGCGAGCG GGGCAAGCCC
GTCGTCGCCT CCATGGGGGC GGTCGCGGCA TCGGGCGGCT ATTACGTGTC GATGGCCGCC
GACGCGATCG TGGCCAACCC CGGCACCATC ACCGGCTCGA TCGGCGTGCT GACGGGCAAG
CTCGTCGCCC GCGAGCTCAA GGACCGGCTC GGCGTCGGGT CGGACACGGT GCGCACCAAC
GCCAACGCCG ACGCCTGGTC GATCAACGCG CCGTTCACCG ACGAGCAGCA GGCGCACGTC
GAAGCCGAGG CCGACCTGTT CTACCGCGAC TTCGTCCAGC GGGTCGCCGA GGGCCGCCAC
CTCAGCGTCG AGGCCGTGGA GCAGGTGGCC CGCGGCCGGG TGTGGACCGG TGCCGATGCG
CTCGAGCGCG GCCTCGTCGA CGAGCTCGGC GGGCTGCGGA CCGCGATCAG GCGGGCCAAG
GTGCTGGCAG GCATCGACGA GGACACCAGG GTCGAGGTCG AGAACCTGCC GAGCTCGTCC
CTGCTGGATG TGTTGCGGCC CAAGCCGTCC TCGCTCCCGG CGGCGGCCTC GCTGCAGGAG
GTGTTCGGCG CGTTGGCGAT TCAATCGGTC CTCGGCATCG CCGACCGCAC GCAGCGGTCG
CTCACCGGCG TCAACGTGCT GTGGCTGGGG GAGACGCGCT ACTGA
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| Protein sequence | MFSALSGVPG FDDVREFARK VDTARHQGVP DGCILELDLQ SAPPESAGFD PIAVISGVIG
PGRPLLLREA VAAIHRAAED PRVAGLIARV QIDAAPPGPV QELRDAIVAF TGKKPSLAWA
ETYPGTLSYY LASAFGEVWM QPSGTVGLVG FATSALFLRD ALDKLGVQAQ FVTRGEYKSA
ANLFTQDSYT DAHREADTAL VNGLRTQVWD AVAASRGIDR AALDALADRA PLLRDDAVTA
GLVDRIGFRD EAYARIAEMS GAEGVSPETG DPDGEDAPPR LFLARYARTK RPSVPGLRRH
PKIAVVTVAG PIVSGRGGRQ MSPMGGSSSG ADTIAAALRR AAADDDIAAI VLRVDSPGGS
VTGSETIWRE VVRTRERGKP VVASMGAVAA SGGYYVSMAA DAIVANPGTI TGSIGVLTGK
LVARELKDRL GVGSDTVRTN ANADAWSINA PFTDEQQAHV EAEADLFYRD FVQRVAEGRH
LSVEAVEQVA RGRVWTGADA LERGLVDELG GLRTAIRRAK VLAGIDEDTR VEVENLPSSS
LLDVLRPKPS SLPAAASLQE VFGALAIQSV LGIADRTQRS LTGVNVLWLG ETRY
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