| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1337 |
|---|
| Symbol | rplF |
|---|
| ID | 4643693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 1424803 |
|---|
| End bp | 1425342 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639804837 |
|---|
| Product | 50S ribosomal protein L6 |
|---|
| Protein accession | YP_952177 |
|---|
| Protein GI | 120402348 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0097] Ribosomal protein L6P/L9E |
|---|
| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000514634 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGCA TTGGAAAGCA GCCGGTCACG GTCCCGAGCG GGGTCGACGT GACGATCGAC
GGACAGAACG TGTCCGTCAA GGGCCCCAAG GGCACGCTGA CCCTCGACGT CGCCGAGCCG
ATCGCGGTCA CACGCGATGA CGACGGCGCG ATCGTGGTCA CCCGGCCCAA CGACGAGCGG
CGCAACCGTT CGTTGCACGG CCTGTCCCGC ACACTGATCG CCAACCTGGT GACCGGCGTG
ACCGAGGGCT ACACCACCAA GATGGAGATC TTCGGCGTCG GTTACCGCGT CGTGGCCAAG
GGCAGCAACC TGGAGTTCGC CCTCGGATAC AGCCACCCGG TGCTGATCAC CGCCCCCGAA
GGCGTCACCT TCGCGGTCGA GACGCCCACG AAGTTCTCGA TCTCCGGTAT CGACAAGCAG
AAGGTCGGCC AGATCGCGGC GAACATCCGC CGTCTTCGCA AGAGCGATCC CTACAAGGGC
AAGGGGATCC GCTACGAGGG CGAGCAGATC CGTCGCAAGG TCGGAAAGAC GGGTAAGTAG
|
|---|
| Protein sequence | MSRIGKQPVT VPSGVDVTID GQNVSVKGPK GTLTLDVAEP IAVTRDDDGA IVVTRPNDER
RNRSLHGLSR TLIANLVTGV TEGYTTKMEI FGVGYRVVAK GSNLEFALGY SHPVLITAPE
GVTFAVETPT KFSISGIDKQ KVGQIAANIR RLRKSDPYKG KGIRYEGEQI RRKVGKTGK
|
|---|
| |