Gene Mvan_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1336 
SymbolrpsH 
ID4643692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1424389 
End bp1424787 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content64% 
IMG OID639804836 
Product30S ribosomal protein S8 
Protein accessionYP_952176 
Protein GI120402347 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000316434 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA CGGATCCGAT CGCAGACTTC TTGACGCGTC TGCGCAACGC CAATTCGGCG 
TATCACGACG AAGTGACCTT GCCGCACAGC AAGATCAAGG CCAACATCGC CGAAATCCTC
AAGAAAGAGG GCTACATCAG CGACTACCGC ACCGAGGACG CCCGGGTGGG CAAGTCCCTG
GTCGTGCAGC TGAAGTACGG CCCGAGCCGT GAACGCAGCA TCGCGGGCCT GCGCCGGGTG
TCCAAGCCCG GTCTGCGCGT GTACGCGAAG TCCACCAACC TGCCGCGGGT TCTCGGCGGA
CTCGGTGTGG CGATCATTTC CACGTCGTCC GGTCTGAGGA CCGACCGCCA GGCCGCCCGT
GAGGGCGTCG GCGGCGAAGT CCTCGCCTAC GTGTGGTGA
 
Protein sequence
MTMTDPIADF LTRLRNANSA YHDEVTLPHS KIKANIAEIL KKEGYISDYR TEDARVGKSL 
VVQLKYGPSR ERSIAGLRRV SKPGLRVYAK STNLPRVLGG LGVAIISTSS GLRTDRQAAR
EGVGGEVLAY VW