| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1306 |
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| Symbol | rplD |
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| ID | 4643764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 1400226 |
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| End bp | 1400885 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639804806 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_952146 |
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| Protein GI | 120402317 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.265076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.163333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTG AAGATCGAAA GATTCCAGTT AGGACCCCGG CCGGAAAGAC GGACGGCAGC
ATCGAGTTGC CCGCCGAGCT GTTCGACGTG GAGCCCAACA TCGCGCTGAT GCACCAGGTC
GTCAACGCGC AGCTGGCCGC CAAGCGGCAG GGCACGCACT CGACCAAGAC CCGCGGTGAG
GTCTCCGGCG GCGGCAAGAA GCCGTACCGG CAGAAAGGCA CCGGCCGCGC CCGCCAGGGC
TCGACCCGGG CGCCGCAGTT CACCGGCGGT GGCATCGTGC ACGGCCCCAA GCCGCGCGAC
TACAGCGAGC GGACCCCGAA GAAGATGATC CGCGCCGCGC TGCGCGGTGC GCTGTCGGAC
CGGGCCCGCA ACGACCGGAT CCACGCCATC ACCGAGATCG TCGAGGGTCA GACCCCGTCG
ACCAAGAGCG CGAAGTCGTT CCTGGCGACC CTGACCGATC GCAGGCAGGT GCTCGTGGTG
ATCGGCCGCG CCGACGAGGC CAGCGCGCTG AGCGTGCGCA ATCTGCCTGG CGTGCATGTG
ATCTCGCCCG ATCAGCTGAA CACCTACGAC GTGCTCAAGG CTGACGACGT GGTCTTCAGC
GTGGAGGCGC TCAACGCCTA CATCGCCGCC AACACGAAGA CTGAGGAGGT GTCGGCCTGA
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| Protein sequence | MTSEDRKIPV RTPAGKTDGS IELPAELFDV EPNIALMHQV VNAQLAAKRQ GTHSTKTRGE
VSGGGKKPYR QKGTGRARQG STRAPQFTGG GIVHGPKPRD YSERTPKKMI RAALRGALSD
RARNDRIHAI TEIVEGQTPS TKSAKSFLAT LTDRRQVLVV IGRADEASAL SVRNLPGVHV
ISPDQLNTYD VLKADDVVFS VEALNAYIAA NTKTEEVSA
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