Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1236 |
Symbol | rplA |
ID | 4646880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 1320545 |
End bp | 1321252 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639804737 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_952077 |
Protein GI | 120402248 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.988417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.475189 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGA ACAGCAAGGC CTACAAAGAA GCCGCCGAGA AGGTCGACAA GACCCGGCTC TACTCGCCTC TGGAGGCCGC GAAGCTGGCC AAGGAGACGT CGTCGAAGAA GCAGGACGCC ACCGTCGAGG TCGCGATCCG GCTCGGCGTC GACCCCCGCA AGGCCGACCA GATGGTGCGC GGCACCGTGA ACCTGCCGCA CGGCACCGGT AAGACCGCGC GCGTCGCCGT CTTCGCCGTC GGCGACAAGG CCGAGCAGGC CGAGGCCGCC GGCGCCGACA TCGTCGGCAG CGACGACCTG ATCGAGAAGA TCCAGGGCGG CTTCCTCGAC TTCGACGCCG CGATCGCCAC GCCCGACCAG ATGGCCAAGG TCGGCCGCAT CGCCCGCATC CTCGGCCCCC GTGGCCTGAT GCCCAACCCG AAGACGGGCA CCGTGACACC CGACGTGGCC AAGGCCGTGT CGGACATCAA GGGCGGCAAG ATCAACTTCC GCGTCGACAA GCAGGCCAAC CTGCACTTCG TGATCGGCAA GGCGTCCTTC GACGAGAGCA AGCTCGCCGA GAACTACGGC GCGGCGCTCG ACGAGGTGCT GCGTGCCAAG CCGTCCTCCT CGAAGGGCCG CTACCTCAAG AAGGTCGTCG TCTCGACGAC CACGGGCCCG GGAATCCCGG TGGACCCGTC GATCACCCGT AATTTCACGG AGGAGTAG
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Protein sequence | MSKNSKAYKE AAEKVDKTRL YSPLEAAKLA KETSSKKQDA TVEVAIRLGV DPRKADQMVR GTVNLPHGTG KTARVAVFAV GDKAEQAEAA GADIVGSDDL IEKIQGGFLD FDAAIATPDQ MAKVGRIARI LGPRGLMPNP KTGTVTPDVA KAVSDIKGGK INFRVDKQAN LHFVIGKASF DESKLAENYG AALDEVLRAK PSSSKGRYLK KVVVSTTTGP GIPVDPSITR NFTEE
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