Gene Mvan_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1179 
Symbol 
ID4646568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1254524 
End bp1255555 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content71% 
IMG OID639804677 
Productthreonine aldolase 
Protein accessionYP_952020 
Protein GI120402191 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.191301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCG TGCCGTCCGC CGCCTTCGCC TCCGACAACG CCGCCCCCGC GCACCCCAGG 
GTCCTCGAAG CGCTCCACCA CGTGAACCAG GGGCCGGCAC CGTCCTACGG CGACGACCCC
GTCACCGCTG AGGCCGCGGA AGCGCTGCGG ACCGCGTTCG AGTCCCCCGG CGCCGACGTG
TTGTTCGCCT TCACCGGCAC CGCCGCCAAT ATCATCGCGC TCGCGTCGGC GGTGCGGCCG
TGGCACGAGA TCTTCTGCAG CGACGTCGCC CACGTGCTGG TCGACGAGGC GGGCGGGCCG
GTGCGGTTGT CCGGTGCGCA GTTGACCCGG CTGGCCAGCG ACGACGGTCT GATCTCACCG
GACGAGCTGG AACGAAGGGT GCGCGGCCGC AGCGCGGTGC ACCACTCCCA GCCGCGCATC
GTCTCGATCA CCCAGTCCAC CGAGAACGGC CGGGTGTGGA GCGCCACGGC CGTCGCGCAG
TTCGTCGACC GTGCCCACGC GCTCGGCCTG CTGGTGCACG TCGACGGCGC CCGGATCGCC
AACGCCGTTG CCGCCCTGAG CATCTCACCG CTGGAGGCGA TCGGCGACGC CGACATCGTC
AGCGTCGGCG GAACCAAGAA CGGCTTGATG TTCGGTGACG CGATCCTGGT CCGCCGCCCT
GCGCACTTCG ACGGAATTCA CTTCGTGCAG AAGCAGATCG GGCATCTGGC GAGCAAGCAC
CGGTTCGTCG CGGCGCAGTT CGCGGGGCTC TTCGAGGGCG GGCTGTGGCT GCGCAACGCC
GCGCACGCCA ACGCGATGGC GCGCAGGCTC AGTACGGGAC TGGAGGCGCT GGGCCTGCAG
CTGGCGTCCC CGACCGAATC CAACGAGGTG TTCGTCAAGC TCGACGGCGA GGCGCACCGG
CGGCTGGCCG AGCGCTATCT CGTGCACCAG CCCGATCCGG GCCAGCCGGT GGTGCGGTTC
GTGTGCTCGT GGTCGACGAC GGAGACCGAG GTCGACGACG CGCTCGCCGC GCTGCGCAGC
GCCGGAAATT GA
 
Protein sequence
MERVPSAAFA SDNAAPAHPR VLEALHHVNQ GPAPSYGDDP VTAEAAEALR TAFESPGADV 
LFAFTGTAAN IIALASAVRP WHEIFCSDVA HVLVDEAGGP VRLSGAQLTR LASDDGLISP
DELERRVRGR SAVHHSQPRI VSITQSTENG RVWSATAVAQ FVDRAHALGL LVHVDGARIA
NAVAALSISP LEAIGDADIV SVGGTKNGLM FGDAILVRRP AHFDGIHFVQ KQIGHLASKH
RFVAAQFAGL FEGGLWLRNA AHANAMARRL STGLEALGLQ LASPTESNEV FVKLDGEAHR
RLAERYLVHQ PDPGQPVVRF VCSWSTTETE VDDALAALRS AGN