Gene Mvan_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1157 
Symbol 
ID4646721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1230907 
End bp1231554 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content62% 
IMG OID639804655 
ProductTetR family transcriptional regulator 
Protein accessionYP_951998 
Protein GI120402169 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.225528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACG GGCAAAAGCC TGCGCACATC CGTTTTGGCG AAAAGAGTTT GATGATGGAA 
ACTTGCCTGG TGTCGGCGCC TGATCGCTCC AGCAGTCTGC GCGAGCGGAA GAAGACACAG
ACGCGTCTCG CGATACGCCG GGAGGCGTTC CGGTTGTTCG AGACGCAAGG ATATGCGAAT
ACGACGATAG ATCAGATTGC CGAAGCCGCC GAAGTTTCAC CCAGGACTTT CTACCGATAT
TTCGGAGTCA AAGAAGCGTT ACTCCTGTCC GACGATCAGC GTTCGCCCAT TGTCGAGGCA
TTCGCCGGCG CGCCCCGGGA ACTGACGGTC GCGGCCGCCT ACCGGCACGC CGTGGAAGAG
GTGCTCGGGG GGTTGTCCGC GGTGGAGCGC GTGGACGCCA TCGCCGGGCA ACGAATCCTC
TACCAGGTGC CGGAGGCGCT CAACCTGGTC TACACCGAAT ACGTCGCGCT GATCGACTCG
ATCGCCGACG TACTGAGAGA TCGCCTCGAG GAGGACGTGG ACGACCTCGA ACGACGTGTG
ATCGCCGGCG CGGTGGTCGG TGTTGTCATC GCCGCGGCGC ACAACCAACC CCTACCGCAG
GAGTCGGTGT CCAGGGCGCT GACCATCCTG GACACCCGGA TGTCGTAG
 
Protein sequence
MADGQKPAHI RFGEKSLMME TCLVSAPDRS SSLRERKKTQ TRLAIRREAF RLFETQGYAN 
TTIDQIAEAA EVSPRTFYRY FGVKEALLLS DDQRSPIVEA FAGAPRELTV AAAYRHAVEE
VLGGLSAVER VDAIAGQRIL YQVPEALNLV YTEYVALIDS IADVLRDRLE EDVDDLERRV
IAGAVVGVVI AAAHNQPLPQ ESVSRALTIL DTRMS