Gene Mvan_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0998 
Symbol 
ID4645783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1025855 
End bp1026913 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content67% 
IMG OID639804499 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_951842 
Protein GI120402013 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.115682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCGA ACACCGCCGC GCCCCCGCAA GCGTCACGCC GTCGCCGTCT CCTCCTGGCG 
GCCGTCACCG CGATGGTGGT CGGCTCCGTC CCGACGGTGT CCTTCCCGGC CGCCGCCCAG
GTCCCGGAAT TCGACCTTCA GGCTCACCGC GGTGGCCGCG GCGAGACCAC CGAAGAATCA
CTGCGGGCCT TTGCGAAGTC ACTCGAACTC GGGGTCAGCA CACTGGAATT GGACGTCGTC
CTGACCAAGG ACGGTCAGCC TCTGGTCTGG CACGATCCTG TGCTCCAACC CGAGAAGTGC
ACCGACACCG GACCCGCGTT CGCCGCCGAC GCGCAATACC CGTACGTCGG AAAGCTGGTG
CACGACCTCA CCCTGGCCCA GATCCGCACG CTCGACTGCG GGAAGCTGCT CGACGATTTC
CCCGACGCCG AGGTCGTGAC CGCCAACAAG ATCGCGACGC TGCCCGAGGT CTTCGGCCTC
GCCGATTCGT ACGCGGCCGA CGTGCGCTTC AACATCGAGA CGAAGATCGA GGCGGACAAA
CCCGAGACCT CAGCCGGACC GCGCGAGATC GTGGACGCGG TACTCGCCGC GGCCAGGTCG
GCAGGCAAGC TGGATCGGGT CGAGATTCAG AGCTTCGACT GGCGCACGCT GCCGTTGGTG
CGCCACCTCG AGCCGTCGAT CCCTCTGGTG GCCTTGTGGG ACGAGACGAC GTGGGTTCCC
GGCTCGCCGT GGCTGGCCGG GATCGACCCC GCGGTGGTCG GCGATCCCCT CACCGGCGCC
ACGATGGTGG GCGCAGGCAT CGTGTCTCCC GGCTACTCGA TTCCCTATGG CCTGACGCCC
GACGACCCGG GCTTCGCGCT CGTCGCCGAC AGACCCTTCA TCGAACGGGC ACATGCGATG
GGCTTGAAGG TCATTCCGTG GACAGTCAAC GACGAAGACA CCATGCGGGC ACAGATCGTC
GCCGGCGCCG ACGGCATCAT CACCGACTAC CCAGCGCTGC TGCGCGACGT GATGACCCAG
CTCGGTCTGC CGTTGCCACC GCCATACCGC CGTCACTGA
 
Protein sequence
MPSNTAAPPQ ASRRRRLLLA AVTAMVVGSV PTVSFPAAAQ VPEFDLQAHR GGRGETTEES 
LRAFAKSLEL GVSTLELDVV LTKDGQPLVW HDPVLQPEKC TDTGPAFAAD AQYPYVGKLV
HDLTLAQIRT LDCGKLLDDF PDAEVVTANK IATLPEVFGL ADSYAADVRF NIETKIEADK
PETSAGPREI VDAVLAAARS AGKLDRVEIQ SFDWRTLPLV RHLEPSIPLV ALWDETTWVP
GSPWLAGIDP AVVGDPLTGA TMVGAGIVSP GYSIPYGLTP DDPGFALVAD RPFIERAHAM
GLKVIPWTVN DEDTMRAQIV AGADGIITDY PALLRDVMTQ LGLPLPPPYR RH