| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0943 |
|---|
| Symbol | |
|---|
| ID | 4645850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 973054 |
|---|
| End bp | 974589 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639804443 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_951787 |
|---|
| Protein GI | 120401958 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.193061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATACACA ACCTCGCCGA CATCATCCGG GTTCACGGCC GGGAACGCCC GGGCGCACCG
GCGCTGGTGG TGGGTGACCG CACGGTCACC TACGGCGAGC TCGACGACCG CTCCAGCCGG
GCCGCGCAGG CTTTCGCGCA GGCCGGCGTC GGGGTCGGCG ACCGGGTCGC GTTCGTCGAC
AAGAACGGCG CCGAATTCTT CGAAGTCACT TTCGGTCTGG CGAAGGTCGG TGCGGTCGGG
GTGCCGGTCA ACTGGCGGCT GGCGGCACCC GAGATGCGGC ACATCATCGC CGACTCCGGG
GCGAAAATCG TTGTGGTGGG CCAAGACTTC GCCGGCCATC TCGAGGCGAT CGAGGACGGC
CTCGACGCCG ACATCGTGGT GATCGGCGAC CACCCGCGCT GGCCGGCTTT CGACGACTGG
GTCGCGTCGC ATCCGCCCGT CGACCCGGGC GTCGTCACCG GACCCGACGA CGTGGTGCTG
CTGATGTACA CGTCGGGCAC CACGGGCGCC CCCAAGGGCG TCATGCTCAG CAACACCAAC
TACGTGTACA AGACCGGTGG GGTGGCCGGA CCGTGGCAGT TCGACGCCGA CGCCGTCAGC
CTGGCGGTCA TGCCGCTGTT CCACATGGCC GGCTCCGGGT GGGCGCTGGC CGGGCTGTGG
CAGGGCGCGA CGACGGTGGT GCTGCGTGAC GTCGAACCGG CCGCGATCCT CGACGCGATC
GCCCGTCACC GCATCACCAA CATGCTGCTG GTGCCCGCCG TCATCCAATT CCTGCTCGAC
ACCGACGGAG TCGCGGAGGT CGACCTCTCC ACCCTGCGGG TGATCGTCTA CGGCGCGTCA
CCGATCAGCG ACGACGTCCT GGTCCGCGGC ATCGAACGGT TCGGCCCAAT CTTCGCCCAG
GTGTACGGGA TGACCGAGAC GACGGGCTCG ATCACCCAGC TCGACGGCCC CGACCATGTG
CCCGCACTGC TGCGCTCCTG CGGCAGGCCC TACCCGTGGG TGCAGATCCG CATCGTCGAT
GAGACCGGCG CCGACGCCGT TGCCGGCACG GTCGGCGAGG TGTGGACCCG GTCCGAGCAG
AACATGCTGG GCTACTGGAA CAACCCCGAC GCGACGGCGT CGACGCTGAC AGCGGACGGC
TGGCTCAAGA CGGGTGACGC CGGCTACGTC GACGACGACG GCTACCTGTT TCTGCACGAC
CGGATCAAGG ACATGATCGT CTCCGGCGGC GAGAACGTGT ACCCCGTCGA GGTCGAGAAC
GTGCTGATGA CGCACCCCGC CGTCGCCGAC GCCGCCGTCA TCGGCGTCCC CGACCGCCGG
TGGGGTGAGG CGGTCAAGGC CGTCGTCGTC GCGGCCCGCG GCGCCCAGCT CACCGAGGCC
GAACTGATCG CGTTCGCCCG GGACCGGATC GGCGGTTTCA AACTGCCCAA GAGCGTCGAC
TTCGTCGACG TTCTGCCCCG CAACCCGAGC GGCAAGCTCC TCAAACGCGC ACTGCGCGAA
CCGTACTGGG ACGGCGCGGA CCGCCACATC GGCTGA
|
|---|
| Protein sequence | MIHNLADIIR VHGRERPGAP ALVVGDRTVT YGELDDRSSR AAQAFAQAGV GVGDRVAFVD
KNGAEFFEVT FGLAKVGAVG VPVNWRLAAP EMRHIIADSG AKIVVVGQDF AGHLEAIEDG
LDADIVVIGD HPRWPAFDDW VASHPPVDPG VVTGPDDVVL LMYTSGTTGA PKGVMLSNTN
YVYKTGGVAG PWQFDADAVS LAVMPLFHMA GSGWALAGLW QGATTVVLRD VEPAAILDAI
ARHRITNMLL VPAVIQFLLD TDGVAEVDLS TLRVIVYGAS PISDDVLVRG IERFGPIFAQ
VYGMTETTGS ITQLDGPDHV PALLRSCGRP YPWVQIRIVD ETGADAVAGT VGEVWTRSEQ
NMLGYWNNPD ATASTLTADG WLKTGDAGYV DDDGYLFLHD RIKDMIVSGG ENVYPVEVEN
VLMTHPAVAD AAVIGVPDRR WGEAVKAVVV AARGAQLTEA ELIAFARDRI GGFKLPKSVD
FVDVLPRNPS GKLLKRALRE PYWDGADRHI G
|
|---|
| |