Gene Mvan_0922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0922 
Symbol 
ID4645279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp949880 
End bp951331 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content67% 
IMG OID639804422 
Productvirulence factor Mce family protein 
Protein accessionYP_951766 
Protein GI120401937 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.471338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAATC GCCGTTCACG GATCCACCCC GCGTGGTGGA CTGCGCTCCT ACTGGCAACT 
GGTGTCGTGG TGGTGGTGTT CACCGCTGCG TCGTTCAACG GATGGTTCCG ATCCTGGATA
CCGGTCACCC TGCAATCAGA TCGGTCCGGT CTGATCATGG AGCCGGGCGG CAAGGTGAAG
ATGCGCGGCC TGGAGGTGGG CCGGGTCGGG GATGTCAACG CCGTGAGGGG CGGAACGTCC
GTCGAACTCG AGATCGATCC CGCCTATGCG GAATTCATTC CGTCCAACGT GTCTGCAGAG
ATCGACGCCA ACACCGTCTT CGGTGCCAAG TACGTCGATC TGGTCTACCC CGACGACCCG
AGCCCGCAGC GCCTGAAATC CGGACAGATC CTGCGCTCTC GCAACGTGAC CACCGAGGTC
AACACCGTCT TCCAGAATCT GGTCGACCTG CTGGACAAGG TCGACCCCGC CAAACTCAAC
GCGATACTGT CCGCGTTGGC CGAAGGGCTG CGGGGTCAGG GCCCCGCCAT CGGGGAGGCG
ACCACCGCCG CCAACGAGGT TCTGCACGCC CTGAACCCGC GCAGCGACAC CGTGCGCGCC
GACTGGCAGT CGTTGGCGGC CGCCAGCGAA ACCTACAGCG ATGCGGCCCA GGACATCATG
GCGGTGCTCG ATTCCTTCAC CACCACGGCG GTGACGCTCG ATGAGCAGTC GTCGGCCCTG
GATGCATTGT TGGTGAACGC GGCCGGGCTT GCGCGCAGCG GGATCGACCT GCTCGGCGTC
AGCAAGGACG ACTTCGTGCA CACCGTCAAC ACACTGGAAC CGACCACCGG TTTGCTCGAG
AAGTACAGTC CGTCGCTGAC CTGTCTGCTC GTCGGCGCCC AGTGGTTCCT GGACAATGGC
GGACGAGATT ACGTCGGAGG CAACGGATAC TCGATAGTCC TTGACGCCAC CTTGACCTGG
GGGCAGGACC CCTACCGCTA TCCGAGGAAC CTGCCGATCG TCGGCGCGAA GGGCGGGCCA
GGCGGTAAGC CGGGATGTGG CTCGCTGCCC GACGTCACCC AACAGTTCCC CGTCCGGCAT
CTTGTCACCA ACACCGGATG GGGCACCGGC AACGATATTC GTGTCAACCC CGGTATCGGC
TTTCCCGGGT GGGCCAACTA CTTTCCGGTG ACCCGCGCTG TCCCCGAGCC GCCCAGTATC
CGCAACATCG GACCCAGTGC GCCCGGCCCG GTCCCGTATC CGGGAGCACC CCCGCGCGGG
GCGCCGCTCT ACGCGCCCGA TGGCAGCCCA CTGTTCCCGG GGCTTCCTCC GGCGCCCCCA
CCAGGCGCGC CGAGAGAACC GGGACCCACC CCCGGTTCGG AACCGTTCGT GCCGTCCGTG
CCGGCGCTGA TGCAGCCGAC ACCCGCACCG GTTCCCGGCC CTGGCCCGGC CCCGGGGCCG
GCAGCGCCAT GA
 
Protein sequence
MPNRRSRIHP AWWTALLLAT GVVVVVFTAA SFNGWFRSWI PVTLQSDRSG LIMEPGGKVK 
MRGLEVGRVG DVNAVRGGTS VELEIDPAYA EFIPSNVSAE IDANTVFGAK YVDLVYPDDP
SPQRLKSGQI LRSRNVTTEV NTVFQNLVDL LDKVDPAKLN AILSALAEGL RGQGPAIGEA
TTAANEVLHA LNPRSDTVRA DWQSLAAASE TYSDAAQDIM AVLDSFTTTA VTLDEQSSAL
DALLVNAAGL ARSGIDLLGV SKDDFVHTVN TLEPTTGLLE KYSPSLTCLL VGAQWFLDNG
GRDYVGGNGY SIVLDATLTW GQDPYRYPRN LPIVGAKGGP GGKPGCGSLP DVTQQFPVRH
LVTNTGWGTG NDIRVNPGIG FPGWANYFPV TRAVPEPPSI RNIGPSAPGP VPYPGAPPRG
APLYAPDGSP LFPGLPPAPP PGAPREPGPT PGSEPFVPSV PALMQPTPAP VPGPGPAPGP
AAP