Gene Mvan_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0825 
Symbol 
ID4646686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp860626 
End bp861384 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content69% 
IMG OID639804325 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_951669 
Protein GI120401840 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC CAACAGATGC CCGCCGGGTC GCAGTGGTCA CCGGAGCCAG CGCCGGAATC 
GGCGAAGCGA CCGCGAGAAC TCTTGCTGCG CAAGGCTTCC ACGTGATCTG CGTGGCACGC
CGGGAGGCCC CGATCCAGGC GCTGGCGGCC GAGATCGACG GGACGGCGAT TGTGGCCGAC
GTCACCGACC CGACCGCCGT GGCGGCGCTG GCCGGACGGC TGGACCGCGT CGATGTGCTC
GTCAACAACG CGGGCGGGGC CCGCGGGCTG GAGTCGGTCG CCGACGCCGA TGTCGAGCAC
TGGCGGTGGA TGTGGGAGGC CAACGTGCTG GGCACCCTGC ATGTCACCCG TGCGCTGCTG
CCCAAGCTGA TCGGCTCCGG TGACGGGCTG ATCGTCACCG TCACGTCGAT CGCCGCGGTG
GAGATCTACG ACAACGGGGC CGGTTACACC TCCGCCAAGC ACGCCCAGGG CGTGCTGCAC
CGCACGCTGC GCAGCGAACT GCTCGGAAAA CCGGTGCGGC TCACCGAAGT TGCGCCCGGC
ATGGTGAAGA CGGAGTTCTC CTTGAACCGC TTCGACGGCG ACGCCGAACG CGCCGACAAG
GTCTATCAGG GCGTCACGCC GTTGGTGGCC GAGGACATCG CCGAGGTGAT CGGGTTTGTG
GCGAGCCGGC CATCGCACGT CGACCTTGAT CTGATCGTGG TGCGGCCGCG CGACCAGGTG
TCGGGCGCCG CGGGCTCCCG CTTCAACCGG AGCACCTGA
 
Protein sequence
MTTPTDARRV AVVTGASAGI GEATARTLAA QGFHVICVAR REAPIQALAA EIDGTAIVAD 
VTDPTAVAAL AGRLDRVDVL VNNAGGARGL ESVADADVEH WRWMWEANVL GTLHVTRALL
PKLIGSGDGL IVTVTSIAAV EIYDNGAGYT SAKHAQGVLH RTLRSELLGK PVRLTEVAPG
MVKTEFSLNR FDGDAERADK VYQGVTPLVA EDIAEVIGFV ASRPSHVDLD LIVVRPRDQV
SGAAGSRFNR ST