Gene Mvan_0708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0708 
Symbol 
ID4643651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp750552 
End bp751568 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content74% 
IMG OID639804208 
Productglycine oxidase ThiO 
Protein accessionYP_951552 
Protein GI120401723 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID[TIGR02352] glycine oxidase ThiO 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.740866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0447216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGCCC ACACCCGCGG AACGCTCGCC GTCATCGGCG GCGGTGTCAT CGGGCTATCG 
GTGGCACGGC GCGCGCTGCA GGACGGCTGG GCCGTGCGGG TGCACCGCGC CGAGCGGGCG
GGCGCGTCGT GGGTGGCCGG CGGGATGCTG GCCCCGCACA GCGAGGGCTG GCCCGGCGAG
GAGCGGCTGC TCCAGATCGG TCTGGAATCG CTTCGGCTCT GGCGGGAGGG ATTCCTCGAC
GGTCTGCCCC CGGAGGTGGT CACCGCGCGC GAGTCGCTGG TGGTGGCCGT CGACCCGGCC
GATGCCGCGG ACCTGAAAAC CGTCGCCGCG TGGCTTTCCG GGCAGGGCCA TCCGGTGACG
CTGACGACTT CGGCGCGTGA GGTCGAACCC CTTCTCGCGC AAGGTATCCG GCACGGTTTC
CGCGCCGAGA CCGAGCTGGC AGTCGACAAC CGGGCGGTGG TGGCGGCGCT GGCCGCTGAG
TGTGAACGTC TCGGCGTCGA GTGGGCGCCG CCGGTGGCGG CGCTGACCGA CGCCGGCCCC
GCGGACACGG TGGTGATCGC CAACGGCATC GACGCCCCGA CGCTGTGGCC CGGCCTGCCG
GTCCGGCCGG TGAAAGGGGA GGTGCTGCGG CTGCGCTGGC GCCGCGGCTG CCTGCCCGTC
CCGCAGCGGG TGGTGCGCGC CCGGGTGCAC GGACGGCAGG TCTATGTGGT GCCGCGCGCC
GACGGTGTGG TGGTGGGGGC GACGCAGTAC GAGCACGGGC GCGACACCGC ACCCACGGTC
AGCGGTGTCC GCGATCTGCT CGACGACGCG TGCGCGGTGA TGCCCGCACT GGGCGAGTAC
GAGTTCGCCG AGGCGGCGGC CGGTCTGCGG CCGATGACCC CCGACAATCT TCCGCTCGTC
GGCAGACTCG ACGAGCGCAC ACTGGTCGCG GCGGGGCACG GCCGGTCGGG TTTCCTGTTG
GCGCCCTGGA CGGCGGAGTC GATCGCCGCC GAGTTGGAAG GAGCGCTGGT CCGATGA
 
Protein sequence
MPAHTRGTLA VIGGGVIGLS VARRALQDGW AVRVHRAERA GASWVAGGML APHSEGWPGE 
ERLLQIGLES LRLWREGFLD GLPPEVVTAR ESLVVAVDPA DAADLKTVAA WLSGQGHPVT
LTTSAREVEP LLAQGIRHGF RAETELAVDN RAVVAALAAE CERLGVEWAP PVAALTDAGP
ADTVVIANGI DAPTLWPGLP VRPVKGEVLR LRWRRGCLPV PQRVVRARVH GRQVYVVPRA
DGVVVGATQY EHGRDTAPTV SGVRDLLDDA CAVMPALGEY EFAEAAAGLR PMTPDNLPLV
GRLDERTLVA AGHGRSGFLL APWTAESIAA ELEGALVR