Gene Mvan_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0643 
Symbol 
ID4647301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp692327 
End bp693283 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content69% 
IMG OID639804144 
Producthypothetical protein 
Protein accessionYP_951488 
Protein GI120401659 
COG category[S] Function unknown 
COG ID[COG3224] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.12978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGG TCACCGCGGT CACGGTCTTT CATCGGGCCG GGGGCGCCGC CGCGTTCGGC 
GTCTGGGCGC AGCATCTGCT CGCGTCGGCC CGGTCGGCGC CGGGTTACGT GTCGGGACGG
ATCTCGGTGC ACGACGAGCC CGGGCTGGAT TGGGCTGTCG CGGTGACGTT TTCCGAGGAG
ACACCGCTGC ACTCCTGGCT GGACAGTGCG CCGAGGGCCG AGATCCTGGC CGAGGGCCAG
GCCCGCTGCT ACTGGCGCAG CTCGGGTGAA CTCGTCCTGT CGGGGAACGG TCCCGCGTCC
CCCGGCGTCG GACTGTTCCG CCACACCGTC TCCACCGGTA AGGACGCCGA CTTCCGGACC
ATGCAGGTGC AGCTGGCGAC CGTGGCCGCG GGGCTGCCCG GCTACGAGGG CACCACGCTC
CTGCCGCCCG ACGGGGACGG TGAGTGGTCG TCGATCGTGC GGTTCCGGAC CGGGCAACAG
CTGTCGGCGT GGATGCGTTC GGAGGAACGT GATTCCGTGC TGCACGGGCT GCGGTCGACT
CTGAGCGCAG ACTTCTCGGC GGTCTCGAAC ACCACGCCGT TCGGCACCAC CGTGCGCATC
GAGGACGGTC GCACGCTGAT GACGCCGAAC TGGAAATCGG CGATGTTGGT GCTGCTCGTG
CTGTATCCGA CCGTGATGCT GCTCTCGCGC TTCCTCGGCC CCATCCTCGA CAACGCCGGC
GCCGCACCGT GGCTCGGCCT GTGGATCAGT CAGGTCGTCA GCGTCAGCGC GATGCAATGG
TGGCTGATGC CCGCGGCGTC ACGGCCGTTC CGGAAGTGGC TGGACCCGGT CGACGGTGCG
GGAGCCCGCA CCTCCCTGAC CGGCGCCGTG GCCATCGTCG CGATCTATGC CGTGACCTTC
ACGGTGTTCG CCACCGTGCA CGAGCTTCAG TTCTGGGATT ACGCGAGCTC GGTCTGA
 
Protein sequence
MTQVTAVTVF HRAGGAAAFG VWAQHLLASA RSAPGYVSGR ISVHDEPGLD WAVAVTFSEE 
TPLHSWLDSA PRAEILAEGQ ARCYWRSSGE LVLSGNGPAS PGVGLFRHTV STGKDADFRT
MQVQLATVAA GLPGYEGTTL LPPDGDGEWS SIVRFRTGQQ LSAWMRSEER DSVLHGLRST
LSADFSAVSN TTPFGTTVRI EDGRTLMTPN WKSAMLVLLV LYPTVMLLSR FLGPILDNAG
AAPWLGLWIS QVVSVSAMQW WLMPAASRPF RKWLDPVDGA GARTSLTGAV AIVAIYAVTF
TVFATVHELQ FWDYASSV