Gene Mvan_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0617 
Symbol 
ID4646499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp659688 
End bp660923 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content71% 
IMG OID639804118 
ProductYibE/F family protein 
Protein accessionYP_951462 
Protein GI120401633 
COG category[S] Function unknown 
COG ID[COG5438] Predicted multitransmembrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.225708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.665044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCACA CGCACTCTCA TTCGCACTCG CTGAACGGGC CGTCACCGCT GGGACCCCTG 
GCGGCCAGGA TCGTGGTCGG TCTGCTGGTC GCGATCGGGG TCGCGACGCT GATCGGCGCC
GCCCTGCTGT GGCCCAGCGG CGGGAAGGCC GACATCCCGC TGCCTTTCCA GAACGCCGCG
GGCGGCGCGG TGACCACCGA ATCCGGACAC GTGCTGTCCA GCAGCGCGGC GGTGTGCGGG
AGCCCGTCGG TGGGCGCGGT GCTGACGTCG GCACCGGTAC CCGCCGAGGG TGAGGGCGCC
GCCTGTGTGC AGGCGCTGGT GGCCATCGAC TCCGGGCCGA ATCAGGGCGC CAACACACTG
CTGGAGTTCA GCGGCGGTCC GGGCCAGCCG AGCCTGGCCG TGGGCGACGA CATCCGGGTG
AGCCGGCAGG TCGATGACGT CGGGTCCACC ACGTACGCGT TCTACGACTT CGAGCGCGCC
TGGCCGCTGA CGGTGTTGGC GGCGGTGTTC GCGATCGTCA TCGTGGCGGT CGCCCGGTGG
CGGGGGCTGC GTGCGCTGGT CGGCATCGTG ATCGCGTTCG GTGTGCTCGT GGTGTTCCTG
CTGCCCGCAC TGCGCGACGG GGCGCCGGCG GTTCCGGTGT CGCTGGTGGC CTCGGCGGCG
ATTCTGTACG CGGTGATCTA CCTGGCGCAC GGGGTGAGCC TGCGCACCAG CGCCGCCCTG
CTCGGGACGC TGGCCTCGCT GCTGTTGGCC GCCGTGTTGT CCTGGGCGGC AATCGAACTG
GCGCATCTGA CCGGGCTGTC CGAAGATCAG AACAACACCG TGGCGGCATA CCTGGGCAAT
GTGTCGATCA CCGGCCTGCT GCTGGCCGGC TTCATCATCG GGTCGCTGGG TGTGCTCAAC
GACGTCACCG TGACGCAGGC GTCGACCGCG TTCGAACTGG CCGCGCTCGG CGACGGCGCC
TCACGCCGGG CGGTCTTCGT CGGCGCGATG CGGGTCGGCC GCGACCACAT CGCCTCCACG
GTCTACACGC TGGTGCTCGC CTACGCGGGC AGCGCACTGC CGCTGCTGCT GCTGTTCAGC
GTCGCGAACC GCTCCCTCGG TGACGTGCTG ACCAGCGAGA GCGTGGCCAT CGAGATCGCG
CGCTCGGCGG TCGGCGGCAT CGCGCTGGCG TTGTCGGTGC CGCTGACCAC CGGCATCGCG
GTGTTGCTGG CGACGCCGCG GCACACCTCG CACTGA
 
Protein sequence
MTHTHSHSHS LNGPSPLGPL AARIVVGLLV AIGVATLIGA ALLWPSGGKA DIPLPFQNAA 
GGAVTTESGH VLSSSAAVCG SPSVGAVLTS APVPAEGEGA ACVQALVAID SGPNQGANTL
LEFSGGPGQP SLAVGDDIRV SRQVDDVGST TYAFYDFERA WPLTVLAAVF AIVIVAVARW
RGLRALVGIV IAFGVLVVFL LPALRDGAPA VPVSLVASAA ILYAVIYLAH GVSLRTSAAL
LGTLASLLLA AVLSWAAIEL AHLTGLSEDQ NNTVAAYLGN VSITGLLLAG FIIGSLGVLN
DVTVTQASTA FELAALGDGA SRRAVFVGAM RVGRDHIAST VYTLVLAYAG SALPLLLLFS
VANRSLGDVL TSESVAIEIA RSAVGGIALA LSVPLTTGIA VLLATPRHTS H