Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_0396 |
Symbol | |
ID | 4645874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 427789 |
End bp | 429027 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639803904 |
Product | hypothetical protein |
Protein accession | YP_951250 |
Protein GI | 120401421 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
TIGRFAM ID | [TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00684947 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.451981 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCTC GCGAGTCGTT CGAGATCGCC GGCGAGCAGG TGCCGATCAC CAATCCGGAC AAGGTGGTGT TCGGCGATCT CGGGCTCACC AAGCTCGACC TGATGCGCTA CTACGCCGCC GTCGCCGACG GGGCGCTGCG CGGCGTCCGG GATCGTCCGA TGATCCTGAA GCGGTTCGTC AAGGGCATCG AGCAGGAGGC CGTCTTTCAG AAGCGGGCCC CGGAGAAGCG GCCGGACTTC GTCGACGTCG CCGAGTTGAA GTACGCGTCG GGCACGTCGG CCAAGGAGGC GGTGCTGCAC GACGCCGCCG GCCTGATCTG GGCGGTGAAC CTCGGCTGCG TCGACCTGAA CCCGCACCCG GTGCGCGCCG ACGACCTCGA GCACCCCGAC GAATTGCGGG TCGACCTCGA CCCGATGCCC GGGGTGGGCT GGCGCCAGAT CCTCGACGTG GCGTTCGTGG CGCGGGAGGT GCTGGAGGAC CACGGCCTGG TGGCCTGGCC GAAGACGTCC GGCTCGCGTG GCTTCCACAT CTATGCGCGC ATCCACCGCC GCTGGCCGTT CAAGCTCGTC CGGCTGGCGG CCGAGACCGT TGCCCGCGAG GTCGAACGCC GGGCCCCGGA GTCGGCGACG GCGCGGTGGT GGAAGGAGGA ACGCCAGGGT GTGTTCGTCG ACTTCAACCA GAACGCCAAG GACCGCACCG TGGCGTCGGC GTACTCCGTG CGGGCCACCC CGGATGCGCG GGTGTCGACG CCGCTGTTCT GGGACGAAGT CGCCGACTGC CGCCCCGAGG AGTTCACGGT GCGCACCGTG CCGCGCCGGT TCTCCGAGCG CGGCGATCCC TGGGAGGGAA TGGACGATGC CGCGGGCGGC CTGGAGGCCT TGCTCGACCT CGCCGACCGG CTCGGGCCGG CCGAGAAGGC GCCCAGGGGT GCCCGCAAGT CAGCCGACGG CCGCAGGGTT TCGGTCATGC CGTTGATCGA GATCGCCCGG ACCAAGACCA AAGACGAGGC CATGGCGGCG CTGCAGCAGT GGCGCGACAA GTATCCGGCT GCAGCCGAAA AGCTGGAGCC CGCAGACGTT CTCGTCGACG GCATGCGCGG CCCCAGCTCG ATCTGGTACC GGATCCGGAT CAACCTGCAA CACGTCGCCG AGGACGCGCG GCCCGCACAG GAGGAGCTGC TGGCGGACTA CAATCCGTGG CACAACTACA CCGGCGCGCA GCAACAGCGC CGCGACTAA
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Protein sequence | MAARESFEIA GEQVPITNPD KVVFGDLGLT KLDLMRYYAA VADGALRGVR DRPMILKRFV KGIEQEAVFQ KRAPEKRPDF VDVAELKYAS GTSAKEAVLH DAAGLIWAVN LGCVDLNPHP VRADDLEHPD ELRVDLDPMP GVGWRQILDV AFVAREVLED HGLVAWPKTS GSRGFHIYAR IHRRWPFKLV RLAAETVARE VERRAPESAT ARWWKEERQG VFVDFNQNAK DRTVASAYSV RATPDARVST PLFWDEVADC RPEEFTVRTV PRRFSERGDP WEGMDDAAGG LEALLDLADR LGPAEKAPRG ARKSADGRRV SVMPLIEIAR TKTKDEAMAA LQQWRDKYPA AAEKLEPADV LVDGMRGPSS IWYRIRINLQ HVAEDARPAQ EELLADYNPW HNYTGAQQQR RD
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