| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0272 |
|---|
| Symbol | |
|---|
| ID | 4647570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 309258 |
|---|
| End bp | 310979 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639803781 |
|---|
| Product | acyl-CoA synthetase |
|---|
| Protein accession | YP_951127 |
|---|
| Protein GI | 120401298 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.984727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.936672 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCC AGTCGTCGAT CCTGTCGATG CTGCACGGGC GCGCCAGCAT GCGCCCCGGC
GACGTCGCCT TCACGTTCAC CGATTACGCC GTCGACCCGG CGGGTGTCCG GCAGACCCTC
ACCTGGTCGC AGCTGTCGAT CCGGACGCTG AACCTGGCCC GCGAGATCCG CAGGCACGGG
GCGGTCGGGG ACCGGGCACT GATCCTGGCC CCGCAGGGCC TGGAGTACAT CCTGGCGTTC
CTGGGATCCA TGCAGGCCGG ACTCGTCGCG GTGCCGCTGC CCCTGCCTCA TCCCGGTTCC
GGTCACGACC GAGTGGGCGC GGTCCTCCAC GACACCGAGC CGTCGGTGGT TCTCACGACG
TCCGCGACGG CCAATGACGT CGGCGACTAC GTCGCCTCGT CGCGTCTGGA TGCCGCGCCG
ACGATTGTCG AGGTCGACGC GTTGGATCTG GACGCCGGGG GCGGGCTGAG CCTGGAGCCG
GCTGATCTGC CGAGCATCGC GTACCTGCAG TACAGCTCGG GTTCGACGCG GCTGCCGGCC
GGCGTCATGC TCTCGCACCG CAACCTCACC GTGAACTTCG AACAGCTGAT GCGCAGCTTC
TTCGCGGAGA AACCGCTGCC GCCGGACGCC ACGCTGGTGT CGTGGCTGCC CTTCTACCAC
GACATGGGGC TGGTGCTGGG GGTCTGCGCA CCGATTCTGT GCGGCCGCCG CGCCGAGCTG
ATGAGCCCGG TGTCGTTCCT GGAGAAGCCC TCCCGCTGGA TGCGTGCGCT GGCCGAGAAT
CCGCATGCGT GGTCGTCGGC GCCGAATTTT GCGTTCGATC TGGCCGCCCG CAAGACCACC
GACGCCGATC TGGCCGGGCT CGACCTCGGT GGCGTGGTCG GCATCATCAG CGGTGCCGAG
AGGGTGGAGC CGGCCACATT GCATCGATTC GTGGATCGGT TCGCGCACTT CAATTTTCAA
GATCACATGA TGCGTCCGTC CTACGGTCTC GCCGAGGCGA CGGTGTTCGT CGCGTCGGGC
GTCTGGAGCG AATCGTCGCC GGCGGCGCAC TTCGACACCG AGGGACTGGC CGCGGGCCGC
GTTCAACCGT GCGCTGCCGG CAAGGGCACC GCGCTCGTCA AATACAAAGT GCCGCAATCG
CCGTTGCTGC GGATCGTCGA CGGCGATACT CACCGCGAAT GTCCTTCGGA TGTCATCGGG
GAGATCTGGG TGCACGGTGA GAACGTCGCC GCCGGCTACT GGAACAAACC CTCCGAAGAC
CAGAGCTGTT TCGGCGCAAC ACTTGTCGAT CCTGCGCCGG GTGTGCCGGA CGGGCCTTGG
CTGCGTACCG GGGACCTCGG CTTCATCGAC GGGGGTGAGT TGTTCATCGT CGGCCGGATC
AAGGATCTGT TGATCATCCG GGGGCGTAAC CATTATCCCG AGGACATCGA GGCGACGGTG
CAGGAGATCA CCCGGGGCCG GGTCGCGGCG ATCTCCATCC CGGTGAACAG CACCGAGAAG
CTGGTCACCG TCATCGAACT CAAGAAGCCC GCTCACCTCG GCGAACTCAG TGAGGTCAAG
AGCGATGTCA CCGCTGCGAT CTCGAATGCG CACGGCCTGA ACGTCGAGGA CCTGGTGCTG
GTGCCATCCG GGTCGATTCC GACGACGACG AGCGGCAAGA TCCGTCGTGC CGCGTGCGTG
GAGCAGTACC GGCAGGACCA GTTCGTTCGC TTGGACGCCT GA
|
|---|
| Protein sequence | MTSQSSILSM LHGRASMRPG DVAFTFTDYA VDPAGVRQTL TWSQLSIRTL NLAREIRRHG
AVGDRALILA PQGLEYILAF LGSMQAGLVA VPLPLPHPGS GHDRVGAVLH DTEPSVVLTT
SATANDVGDY VASSRLDAAP TIVEVDALDL DAGGGLSLEP ADLPSIAYLQ YSSGSTRLPA
GVMLSHRNLT VNFEQLMRSF FAEKPLPPDA TLVSWLPFYH DMGLVLGVCA PILCGRRAEL
MSPVSFLEKP SRWMRALAEN PHAWSSAPNF AFDLAARKTT DADLAGLDLG GVVGIISGAE
RVEPATLHRF VDRFAHFNFQ DHMMRPSYGL AEATVFVASG VWSESSPAAH FDTEGLAAGR
VQPCAAGKGT ALVKYKVPQS PLLRIVDGDT HRECPSDVIG EIWVHGENVA AGYWNKPSED
QSCFGATLVD PAPGVPDGPW LRTGDLGFID GGELFIVGRI KDLLIIRGRN HYPEDIEATV
QEITRGRVAA ISIPVNSTEK LVTVIELKKP AHLGELSEVK SDVTAAISNA HGLNVEDLVL
VPSGSIPTTT SGKIRRAACV EQYRQDQFVR LDA
|
|---|
| |