Gene Mvan_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0218 
Symbol 
ID4647731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp230995 
End bp232545 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content66% 
IMG OID639803727 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_951073 
Protein GI120401244 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0925378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCC GCGACACCGC CGTTGCCACC CCTGACAAAC CGGCCATCAT CATGTATCCC 
TCCGGGACCG TGGTGACGTT CGGCGAACTC GAAGCCAGGG CGAACCGGCT GGCCCACCTG
TTCCGGGACG CCGGCCTCGT CGAGGGCGAC GCCGTCGCGA TCCTGATGGA GAACAACGAG
CACATCCACG CCGTGATGTG GGCAGCGCGC CGCGCCGGGC TGTACTACGT GCCCATCAGC
ACCCACCTCA CCGCGGCGGA GGTGGCCTAC ATCGTCGACA ACAGCGGCGC CAAGGCCATC
GTCGGCTCCG CCAAGCTCAA GGACACCCTG GCCGGGCTGG CCGAAGAACT TCCAAACGGC
CTGCCGCCGC TGCGGCTGAT CGCCGGGGGA GCCGAATCGT CGGCGACGAG CGCCTCCAGC
GAGCTCGAGG GCTGGCAGCG CTATCCCGAG TGCGTGGCCG ACAAGCCCGA CACCCCGATT
GCCGACGAGA TCGAGGGCGA CCTGCTTCAG TACTCCTCCG GAACCACGGG ACGCCCCAAG
GGCATCAAGC GTGAACTGCC GCATGTGCCA CCCTCGGAGT CGCCCGGGTT GATGGCCGCG
CTGGTGTCCT TCTGGATGCA CCCGGATGCG GTGTACCTCA GCCCCGCCCC CCTCTACCAC
ACCGCGCCGT CGGTGTGGTC GATGCAGACG CAGGCCGGTG GCATCACCAC CGTGGTGATG
GAGAAGTTCG ACGCCGAAGG CGCGTTGGAC GCGATCGCCA AGCACAAGGT GACGCACGGC
CAGTTCGTGC CGGTGATGTT CACCCGGATG CTGAAACTGC CTGAGGCCGT GCGCAAGTCG
TACGACGTAT CGAGCCTGGA GCGGGTCATG CACGCCGCCG CACCGTGCCC GGTCGACATC
AAGAAGCAGA TGATCGACTG GTGGGGTCCG ATCGTCGACG AGTACTACGC GTCCTCGGAG
GCGCACGGGT CCACGCTGAT CAGCGCCGAG GACTGGCTGA CGCACCCGGG TTCGGTCGGC
AAACCGTTGA CCGGTGTCGT CCACATCGTC GGCGAGGACG GCGAGGAGCT CCCGCCGGGC
CAGGCCGGCG AGATCTACTT CGAAGGCGGC TACGACTTCG AATACCTCAA CGACCCCGAC
AAGACCGCCT CCTCACGCCA TCCGCAGGGC TGGAAGACGG TGGGCGACAT CGGATATCTC
GACGACGAGG GTTACCTCTA CCTGACCGAC CGTCGCCACC ACATGATCAT CTCCGGCGGG
GTCAACATCT ACCCGCAGGA GGCCGAGAAC CTGCTCGTCA CACACCCCAA GGTGATGGAC
GCCGCGGTGT TCGGCATCCC CGACGAAGAG ATGGGGCAGA GCGTCAAGGC CGTGGTCCAG
ACGGTGGATC CCGCCGACGC CACCGAGGAG TTCGCCGCCG AACTCATCTC CTGGCTGCGG
GATCGCCTAG CCCACTACAA GTGCCCGCGC TCCCTGTCGT TCGAGGCGCA GCTGCCCCGC
ACCGACACCG GCAAGCTCTA CAAGCAGGAG CTGGTGAAGA AGCACTCGTG A
 
Protein sequence
MQIRDTAVAT PDKPAIIMYP SGTVVTFGEL EARANRLAHL FRDAGLVEGD AVAILMENNE 
HIHAVMWAAR RAGLYYVPIS THLTAAEVAY IVDNSGAKAI VGSAKLKDTL AGLAEELPNG
LPPLRLIAGG AESSATSASS ELEGWQRYPE CVADKPDTPI ADEIEGDLLQ YSSGTTGRPK
GIKRELPHVP PSESPGLMAA LVSFWMHPDA VYLSPAPLYH TAPSVWSMQT QAGGITTVVM
EKFDAEGALD AIAKHKVTHG QFVPVMFTRM LKLPEAVRKS YDVSSLERVM HAAAPCPVDI
KKQMIDWWGP IVDEYYASSE AHGSTLISAE DWLTHPGSVG KPLTGVVHIV GEDGEELPPG
QAGEIYFEGG YDFEYLNDPD KTASSRHPQG WKTVGDIGYL DDEGYLYLTD RRHHMIISGG
VNIYPQEAEN LLVTHPKVMD AAVFGIPDEE MGQSVKAVVQ TVDPADATEE FAAELISWLR
DRLAHYKCPR SLSFEAQLPR TDTGKLYKQE LVKKHS