| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0169 |
|---|
| Symbol | |
|---|
| ID | 4645185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 178656 |
|---|
| End bp | 179477 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639803680 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_951026 |
|---|
| Protein GI | 120401197 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.476438 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCGTG CATTGCCGCA CAAGATCGCC GTCATCACCG GCGGAGCGTC GGGCATCGGA
GCGGGCACCG CGCGGAGGTT CCTCGCCGAA GGCGCCCGCG TGGTGATCGC CGACATCGAC
CGTGAGCGCG GGGAGGCGCG CGCTGCCGAA CTCGGGCCCG ACTGCGTCTT CAAGTACACC
GACGTCGCCA GCCGCGACGA CGTCACCGAA CTCGTCGAAT ACGCCGTGGA CCGCTTCGGT
GGACTCGACG TCATGATGAA CAACGCCGGA ATTTCGGGCC GGATGCAGCC GGAACTGCTC
GACGACGACT TCGCCGACTT CGATCGCGTC ATGCGTGTCG ACCTGCTGGG CGTCATGCTC
GGCACGCAGA TCGCGGCGCG CCACATGAAG GACCACGGCG GCGGATCCAT CATCAACACC
ACGTCCATCG GCGGGATCCA GGCCGGCTGC ACCGTGATGA CCTACCGCGC CGCCAAAGCC
GGCGTCATCC ACTTCACCAA GTCCGCGGCA ATCGACCTCG CGCAGTATGC GATTCGCGTC
AACACCATTG CACCCGGGGG CATCCCGACG GCGATCCTCT CCGCCGCCAC CGGGGTTGAC
GAGTCCGACG AGCTGGGCAC CACCGCGGCG ATCCGCAAGG AGATCGCGGC CGAGCGTCCA
CTGAAGATGA CCGCGTCGGT CGACGACATC GCCGCGGCCG CCGCATATCT CGGCAGTGAA
GACGCCCGCT ATGTCACCGG GGTGGTACTC CCTGTCGACG GTGGGATGAC GGCGGGTAAT
CCTCGTAATC CGTTGCGCGA CTTGATGATC GCCGCACATT GA
|
|---|
| Protein sequence | MVRALPHKIA VITGGASGIG AGTARRFLAE GARVVIADID RERGEARAAE LGPDCVFKYT
DVASRDDVTE LVEYAVDRFG GLDVMMNNAG ISGRMQPELL DDDFADFDRV MRVDLLGVML
GTQIAARHMK DHGGGSIINT TSIGGIQAGC TVMTYRAAKA GVIHFTKSAA IDLAQYAIRV
NTIAPGGIPT AILSAATGVD ESDELGTTAA IRKEIAAERP LKMTASVDDI AAAAAYLGSE
DARYVTGVVL PVDGGMTAGN PRNPLRDLMI AAH
|
|---|
| |