| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0137 |
|---|
| Symbol | |
|---|
| ID | 4647031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 149815 |
|---|
| End bp | 151449 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639803648 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_950994 |
|---|
| Protein GI | 120401165 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACAG TCTTCAACGT CCGAAACCTC AAGTCGCCCG GCGCTTCCCG CGCGACGCTG
ATCATCGGCG TCATCGTGGT TGTGCTCGCC GTCGTCGGGG CGGTCCTCGG GTGGAATCTG
TACAAGCAGA TGACCACCAA GACCGTGGTC GCCTACTTCA CGCAGACGCT GGCGATCTAT
CCCGGCGACA AGGTCCAGAT CATGGGCGTC CAGGTGGGCT CGATCGACAA GATCGAGCCC
GCGGGCGACA AGATGAAGGT CACCTTCCAC TACGCCGGCA AGTACAAGGT GCCGCAGGAC
GCGACGGCGT CGATCCTGAA CCCGAGCCTG GTGGCGTCAC GCACGATCCA GCTGTCGCCG
CCCTACACCG GCGGACCGGT GCTCGCCGAC GGCGCCGTCC TCGACGTCGA CCGCACCCAG
GTGCCCGTCG AGTACGACGA TGTGCGCGAC TCGATCAGCA GGCTGCTCAC CGACCTCGGG
CCGACGCCCG AGCAGCCGAA GGGGCCGTTC GGCGACATCA TCGAATCGGC CGCCGACGGT
TTCGCCGGCA AGGGTGAGCA GCTGAACAAG ACCCTCAACA ATCTGTCGGA GGCGTTGTTC
GCGCTCAACG AGGGCCGCGG CGACTTCTTC AGCGTCGTCA AGAGCCTGGC CTTGTTCGTC
AACGCACTGC ACCAGAGTGA CCAGCAGTTC GTCGCGTTGA ACAACAACCT GGCACAGTTC
ACCAACGCGT TCACCGACAC CGATCGCGAG GTGGCCGACG CGCTGCGGGA CCTCAACGAA
TTGCTCACCA CCACAAGGAA TTTCGTCGAC GAGAACGGCG AGGTGTTGGC GCACGACGTG
CAGAACCTGG CCGATGTCAC CAACGCGATC CTGCAGCCCG AGCCCCGTGA CGGTCTGGAG
ACCGCGCTGC ACGCATACCC CAACGTCGCG GCGAACCTGA TGAACATCTC GTCGCCGAAC
GCCGGCGGCA TCGTGACGAT GCCGGTGATC TCGAACTTCG CCAACCCGAT GCAGTTCCTG
TGCAGCGCGA TCCAGGCGGG CAGCCGGCTG GGCTACCAGG AGTCGGCGGA GCTCTGCGCG
CAGTACCTGG GTCCGATCCT CGACGCGATC AAGTTCAACT ACCTGCCGTT CGGCGCCAAC
CAACTGCAGA CGGCGATGAC GTTGCCGAAG CAGATCGCCT ACTCCGAGGA GCGGCTGCGG
CCGCCACCGG GATACAAGGA CACCACCGTG CCGGGCATCT TCTCCCGTGA CACGTTGTTC
TCCCACGGCA ACCACGAGCC CGGCTGGGTC GTCGCGCCCG GCATGCAGGG CGTCGAGGTG
CAGCCGTTCA CCCAGAACAT GCTCACTCCG GAGTCGCTGG CCGAGTTGAT GGGCGGCCCG
GACATCGTGC CGCCGCCTGC ACCGCCGGCG TTCGGAACGA CGCGCAACGG CAACCTGCCC
GGACCGCCGA ACGCGTTCGA CCAGAACAAC CCGCTGCCGC CGCCGTGGTA TCCGCAGCCT
GGTCCGCCGC CCGCCCCCGC GCCCGGTGTC GTCCAGGGCA ATCCACTCGG CGCGATCGCG
CCCGCCGCAC CGCCTGCGGG ACCCGCGCCC GCGGCGCCGT CCGGTCCGCT GTTGCCGGCC
GAGGCAGGAG GCTGA
|
|---|
| Protein sequence | MSTVFNVRNL KSPGASRATL IIGVIVVVLA VVGAVLGWNL YKQMTTKTVV AYFTQTLAIY
PGDKVQIMGV QVGSIDKIEP AGDKMKVTFH YAGKYKVPQD ATASILNPSL VASRTIQLSP
PYTGGPVLAD GAVLDVDRTQ VPVEYDDVRD SISRLLTDLG PTPEQPKGPF GDIIESAADG
FAGKGEQLNK TLNNLSEALF ALNEGRGDFF SVVKSLALFV NALHQSDQQF VALNNNLAQF
TNAFTDTDRE VADALRDLNE LLTTTRNFVD ENGEVLAHDV QNLADVTNAI LQPEPRDGLE
TALHAYPNVA ANLMNISSPN AGGIVTMPVI SNFANPMQFL CSAIQAGSRL GYQESAELCA
QYLGPILDAI KFNYLPFGAN QLQTAMTLPK QIAYSEERLR PPPGYKDTTV PGIFSRDTLF
SHGNHEPGWV VAPGMQGVEV QPFTQNMLTP ESLAELMGGP DIVPPPAPPA FGTTRNGNLP
GPPNAFDQNN PLPPPWYPQP GPPPAPAPGV VQGNPLGAIA PAAPPAGPAP AAPSGPLLPA
EAGG
|
|---|
| |