| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0122 |
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| Symbol | |
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| ID | 4648054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 136098 |
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| End bp | 137135 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639803633 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_950979 |
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| Protein GI | 120401150 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4521] ABC-type taurine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family
[TIGR01729] taurine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.592711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA AAGCCCTTCT CGTGGTTCTC GTCTCGGCCG TGCTGGCCCT GGCGGGCTGC
TCGGTGGACA ACGGAGGGCA GCACGGCGAC GACTCAGGCA AGCCGACCAT CCGGATCGGC
TACCAGACGT TCCCGAGCGG CGACCTGATC GTCAAGAACA ACAAGTGGCT CGAAGAAGCG
TTGCCCGACT ACAACATCAA GTGGACGAAG TTCGACTCGG GCGCCGACGT GAACACGGCC
TTCGTGGCAG GAGAACTCGA CTTCGGTGCG CTGGGCTCCA GCCCCGTCGC GCGCGGCCTG
TCCGAGCCGC TGAACATCCC GTACAAGGTC GCGTTCGTGC TCGACGTCGC CGGCGACAAC
GAGGCCCTGG TGGTGCGTAA CGGGGCAGGC GTCGACACCA TCGCGCAACT GAAGGGCAGG
CGTATCGGCA CCCCGTTCGC GTCCACCGCG CACTACAGCC TGCTGGCCGC GCTCGACCAG
AATGGCTTGT CGGCCAACGA TGTTCAGCTA ATCGACCTGC AACCGCAGGC CATCCTCGCG
GCCTGGGAGC GCGGGGACAT CGACGCCGCC TACACCTGGC TGCCGACCCT GGACGAGCTG
CGCAAGACCG GCCGGGATCT GATCACCAGT CGTCAGCTCG CCGATGCCGG CAAGCCCACG
CTCGATCTGG CGACCGTCAG CGACGAGTTC GCGTCCGCCC ACCCCGAGGC CGTCGATGTG
TGGCGGCAGC AGCAGGGACG CGCGCTTGAC CTCATCCGGG AGGATCCGCA GGCTGCCGCC
GAAGCCATCG CCGCCGAGAT CGGCCTGACC CCGCAGGATG TGGCCGGTCA ACTCAAGCAG
ATGGTGTTCC TCACCCCGCA GGACATCTCA TCCACGGAAT GGCTTGGCAC TGAGGGTAAT
CCAGGCAACC TCGCGGTGAA CCTGGAATCC GCTTCGCAGT TCCTGGCCGA TCAGTCGCAG
ATCCCGGCCG CGGCGCCGTT GAAGACGTTC CAGGACGCCG TCTACACGAA AGGCCTACCG
GGTGCCCTCA ACGAATGA
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| Protein sequence | MKLKALLVVL VSAVLALAGC SVDNGGQHGD DSGKPTIRIG YQTFPSGDLI VKNNKWLEEA
LPDYNIKWTK FDSGADVNTA FVAGELDFGA LGSSPVARGL SEPLNIPYKV AFVLDVAGDN
EALVVRNGAG VDTIAQLKGR RIGTPFASTA HYSLLAALDQ NGLSANDVQL IDLQPQAILA
AWERGDIDAA YTWLPTLDEL RKTGRDLITS RQLADAGKPT LDLATVSDEF ASAHPEAVDV
WRQQQGRALD LIREDPQAAA EAIAAEIGLT PQDVAGQLKQ MVFLTPQDIS STEWLGTEGN
PGNLAVNLES ASQFLADQSQ IPAAAPLKTF QDAVYTKGLP GALNE
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